Gene detail

Detailed information of Bpl_scaf_8775-17.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_8775-17.8	ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEIN HOMOLOG	Bpl_scaf_8775	1706857	1747611	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_8775-17.8

ATGTCTGAAGACAAACCAGAATATTTGTCTGCCGAAGCTCTTCGTAATCGACTGTATCACAGTTTATGTGATAAAGGAACAGTGGACAGCATAAAGAGTCAGTTGAGGAATAAGATAGTGGAGGAGTTACAGCACTCATACAAAGGTCATTTGTCAGTCAGAGATCTGAAGATTCCTGATGAAGGTTCCTTGTTACATAGAGCAGCTAACAGCTTGGTGGCAGATCATCTTAGAAGTTGTCAATATGATTACTCATTTAGTGTCTTCCTTCCTGAAAGTAAAACAGCAAAAGACAAGATTTTTGCAACAGAGGATCTATTACAGTTACTTGGTATCAGTCCATCGTCTAGACTTTATATGAAAATGGTCTCTGGTAAAAAAGATCAAGCAAAGAAAGGTTTTTTATGGCAGTTACTTTGTGAGTTATCTGCCCTTCATTCCAATGCTGTACAGGAAGCTGGAGTTCAGACAGAACTGATCAGGGTAGCTGCAGTATCCTCACTTGATGAAAGACTAAATGGTGTAGATGATTTTTATTCCTCTAAGAGAGATGAACATTTTAGAACGAGTGCTGTGGCAGTTGAAGATCGGTTAATGTCATTCCAACGGCAGTTAGAGGAGAGATATAGGACAGATCTCAAAATGGAGCTTGCAAGAATGAAAGACAATGAAATAGCCAGGATAAAAATGGAAGAGAAAGAAAATTCAAGAAGAGAATTAGAACAACTTAGAAGAGAGTTGGAGAGACAATATCAAACAAAGATGGATGCATTATCACTGAAGGAAAGAAATACAATGGAGAGAATACAGAATGAACAAACGATGCATGACAGAGAAATATATACTCAGAGGCAGTCTTTACTGGATGAAATAGAAATTCTGAGGAAGAGGGAGGCAGAGATTAAAAGAGAGGATGAAATGAATCAGAGAGAAGCCAAATTGAATGTAGACAGAGTAAAGGCTAAAGAAGAAGCTGTTAGACAGAGAGACCAGGAAGTAAGAAAGATGGAAATAGAATATGAACAAAGATTGAAGAATGAAATGACCAAATTTAAAGTAGAAGAACAAGCCAAGTATATGGAGAGGGCACAGAAGGTAGAGATAAGAGAGGCTAGAGTGAAAGATGAAGAAAGGAGAGTTAAGGATGAAAAAGATCAAATACAGGAAATTAAAGACCTTTTGAGAGACAAAACATTAAGAGCAAATGAACTAGAGACTCAGCTACACGAAGAAAGACACAAAGACATTTCTGCTACAAGACAGAATGAGATACTTAATGCTAAATTAAGAGATATGTCAGACTATAAAGTTATGAAAGAACAGAGTGTTGTTATGAAGAATGAAGTAGAAACATTGAGAACGAGGTTAGCAGAAGTGTTAAATATGAATGAAAGAGAAAGAGGAAGACAAGAGGAGTTATTAAGAGAGTTACGAAGACCATCACCAGAGACATTAATGTTACAAAGAGATTTGGAGAAAGCACGGGAGAATTTACGTCAAGAACTTGTCATAGCAGGAAGTCAAAAAACACATCTAGAAAATAGACTACAGGAAGAGATGGACAGAAACAGAGATTTAGTCAGACGATTTGAGGAGCAGACGGTCACTATTAGAGACATGAATAGAGAAATAGTAGATATGAGGTCACAGTTAACTGTTACACATCAAGCATTAACCAATGAAGTTTACAGAAAACCAGCTGATGATGCAGATGCTCCAGGTATATTCCGTGGGTCAAGGTCAATACCTCTACCTAGAACTGAAACTGATGATGAAATAGACGATGAGTTTCAAAAGCTACCAGGAAGTCAGTATGCCAGTAAATTATCTAGTCCTAAACGTCGACCGCAGACAGCGTACGATGAGAATGATATGATGGATGATATTGAGGCAGAGTATAATTTACCCTCGGCTAAACCAGGAAGAAAATTGTACCCTGCCTTCTCTGAAGATGATAGGTCTTCTACTGTATCAGCAGATGTTATAGCTGATGCTAAATATAGATTAAAAAGTCTTGAAAGAGAGGCTCAGAATTTAGACCAGGCCTATAGAGATTTCCATTACAATCTAACTAACCCAGCAGCAGGACCTGATGAACAGGCAAGGTCACATGATAGACTGATGAAAGAACCAGAAGTTACCTCCAGTAGTCAGAAGAGAGTTGTTTCCCCTACAGCTAGTCCAATACATAGGCCAATGTCTTCTACACCATACGAGGGCAGACAGTCAAGTCAACTGAATGATAGTCTAAGAGAACTAACTGAGCAGTCATCATCTAGAGACAGAAAAGAGCCACCCCCTAGATTTGATATGTCTAACATGTCTGATGACTACAATGAGAGGAATGGTGATGAGAGAGTAGAAAGACCACGCCCCATCACCGTCGCTGATCTAGAAGCCAGACCTGGGTCCCCTAGTATTGTTGTAGTGCCAGGGTCAGAATCCAGTGTAGCAACGTCTGCCTTAGATTTAGACAAAAAAGATATGTATAAAACACCTACTGGACCTGTTGGTGGGAAACTGGCACCTATATCACTAGACACAGCCTGGAAAACACCCTCATTGGAAGATGAATGGAAGTCTAAAGAAACCAGTAATCTACCTCCCTTAGGAAGTAAACTCCCTCCCCTCATGACTGAGAAACCATCATTAGATGATAACTGGAAGTCTAAAGAAGATGAAATAAAAGAAGAAGAAGAAAAGAAAAGAAAGGAGGAAGAGGAGGAGAGAAGATGGCAGGAAGAGAGACAAAGAAAAGAGGAAGAAAGAAAAAAACATGAACAAGAGGCCTGGGAGAGGGAGCAGAGAGAATTATATAAACTACAGCAATCTGGTGGTGATGTAGATGAGATGGATGGAGAACCTCCAGAGGAAGAAGACAAGAAGGCAGAAGGAGAGGGAGAAGACGTGATTGACCCAGTCATGAAACAGTACATGGAGATGGTACAACAACAAAAGGACAAAGAAAAACAGGTAGCTAAGAAGACAATAAGCACATGGTCTAAAGGTCACAGATTAAGTCAGGAGACACCCACCCATTCTGAACAGGATTTATCTGTCGCTGAAGACATCAATAGTAACAACTCAGATGGAGGTTTTTCTGACTGGTGA

Transcript

Bpl_scaf_8775-17.8

CCGATGTAAACAAAGCGCTCTTTTCAAAAATGTCTGAAACCATTCCGGATGACAACCGATAAACTTACAAAATATTTGAAAAGGGAGTGAAAAAGAGACATGAGACTCAAATCTACAGATTTACCGTATATTGATTGTTTATTCGTATAATAAAAAAGAAGGATCGAAGATCAAAATGTCTGAAGACAAACCAGAATATTTGTCTGCCGAAGCTCTTCGTAATCGACTGTATCACAGTTTATGTGATAAAGGAACAGTGGACAGCATAAAGAGTCAGTTGAGGAATAAGATAGTGGAGGAGTTACAGCACTCATACAAAGGTCATTTGTCAGTCAGAGATCTGAAGATTCCTGATGAAGGTTCCTTGTTACATAGAGCAGCTAACAGCTTGGTGGCAGATCATCTTAGAAGTTGTCAATATGATTACTCATTTAGTGTCTTCCTTCCTGAAAGTAAAACAGCAAAAGACAAGATTTTTGCAACAGAGGATCTATTACAGTTACTTGGTATCAGTCCATCGTCTAGACTTTATATGAAAATGGTCTCTGGTAAAAAAGATCAAGCAAAGAAAGGTTTTTTATGGCAGTTACTTTGTGAGTTATCTGCCCTTCATTCCAATGCTGTACAGGAAGCTGGAGTTCAGACAGAACTGATCAGGGTAGCTGCAGTATCCTCACTTGATGAAAGACTAAATGGTGTAGATGATTTTTATTCCTCTAAGAGAGATGAACATTTTAGAACGAGTGCTGTGGCAGTTGAAGATCGGTTAATGTCATTCCAACGGCAGTTAGAGGAGAGATATAGGACAGATCTCAAAATGGAGCTTGCAAGAATGAAAGACAATGAAATAGCCAGGATAAAAATGGAAGAGAAAGAAAATTCAAGAAGAGAATTAGAACAACTTAGAAGAGAGTTGGAGAGACAATATCAAACAAAGATGGATGCATTATCACTGAAGGAAAGAAATACAATGGAGAGAATACAGAATGAACAAACGATGCATGACAGAGAAATATATACTCAGAGGCAGTCTTTACTGGATGAAATAGAAATTCTGAGGAAGAGGGAGGCAGAGATTAAAAGAGAGGATGAAATGAATCAGAGAGAAGCCAAATTGAATGTAGACAGAGTAAAGGCTAAAGAAGAAGCTGTTAGACAGAGAGACCAGGAAGTAAGAAAGATGGAAATAGAATATGAACAAAGATTGAAGAATGAAATGACCAAATTTAAAGTAGAAGAACAAGCCAAGTATATGGAGAGGGCACAGAAGGTAGAGATAAGAGAGGCTAGAGTGAAAGATGAAGAAAGGAGAGTTAAGGATGAAAAAGATCAAATACAGGAAATTAAAGACCTTTTGAGAGACAAAACATTAAGAGCAAATGAACTAGAGACTCAGCTACACGAAGAAAGACACAAAGACATTTCTGCTACAAGACAGAATGAGATACTTAATGCTAAATTAAGAGATATGTCAGACTATAAAGTTATGAAAGAACAGAGTGTTGTTATGAAGAATGAAGTAGAAACATTGAGAACGAGGTTAGCAGAAGTGTTAAATATGAATGAAAGAGAAAGAGGAAGACAAGAGGAGTTATTAAGAGAGTTACGAAGACCATCACCAGAGACATTAATGTTACAAAGAGATTTGGAGAAAGCACGGGAGAATTTACGTCAAGAACTTGTCATAGCAGGAAGTCAAAAAACACATCTAGAAAATAGACTACAGGAAGAGATGGACAGAAACAGAGATTTAGTCAGACGATTTGAGGAGCAGACGGTCACTATTAGAGACATGAATAGAGAAATAGTAGATATGAGGTCACAGTTAACTGTTACACATCAAGCATTAACCAATGAAGTTTACAGAAAACCAGCTGATGATGCAGATGCTCCAGGTATATTCCGTGGGTCAAGGTCAATACCTCTACCTAGAACTGAAACTGATGATGAAATAGACGATGAGTTTCAAAAGCTACCAGGAAGTCAGTATGCCAGTAAATTATCTAGTCCTAAACGTCGACCGCAGACAGCGTACGATGAGAATGATATGATGGATGATATTGAGGCAGAGTATAATTTACCCTCGGCTAAACCAGGAAGAAAATTGTACCCTGCCTTCTCTGAAGATGATAGGTCTTCTACTGTATCAGCAGATGTTATAGCTGATGCTAAATATAGATTAAAAAGTCTTGAAAGAGAGGCTCAGAATTTAGACCAGGCCTATAGAGATTTCCATTACAATCTAACTAACCCAGCAGCAGGACCTGATGAACAGGCAAGGTCACATGATAGACTGATGAAAGAACCAGAAGTTACCTCCAGTAGTCAGAAGAGAGTTGTTTCCCCTACAGCTAGTCCAATACATAGGCCAATGTCTTCTACACCATACGAGGGCAGACAGTCAAGTCAACTGAATGATAGTCTAAGAGAACTAACTGAGCAGTCATCATCTAGAGACAGAAAAGAGCCACCCCCTAGATTTGATATGTCTAACATGTCTGATGACTACAATGAGAGGAATGGTGATGAGAGAGTAGAAAGACCACGCCCCATCACCGTCGCTGATCTAGAAGCCAGACCTGGGTCCCCTAGTATTGTTGTAGTGCCAGGGTCAGAATCCAGTGTAGCAACGTCTGCCTTAGATTTAGACAAAAAAGATATGTATAAAACACCTACTGGACCTGTTGGTGGGAAACTGGCACCTATATCACTAGACACAGCCTGGAAAACACCCTCATTGGAAGATGAATGGAAGTCTAAAGAAACCAGTAATCTACCTCCCTTAGGAAGTAAACTCCCTCCCCTCATGACTGAGAAACCATCATTAGATGATAACTGGAAGTCTAAAGAAGATGAAATAAAAGAAGAAGAAGAAAAGAAAAGAAAGGAGGAAGAGGAGGAGAGAAGATGGCAGGAAGAGAGACAAAGAAAAGAGGAAGAAAGAAAAAAACATGAACAAGAGGCCTGGGAGAGGGAGCAGAGAGAATTATATAAACTACAGCAATCTGGTGGTGATGTAGATGAGATGGATGGAGAACCTCCAGAGGAAGAAGACAAGAAGGCAGAAGGAGAGGGAGAAGACGTGATTGACCCAGTCATGAAACAGTACATGGAGATGGTACAACAACAAAAGGACAAAGAAAAACAGGTAGCTAAGAAGACAATAAGCACATGGTCTAAAGGTCACAGATTAAGTCAGGAGACACCCACCCATTCTGAACAGGATTTATCTGTCGCTGAAGACATCAATAGTAACAACTCAGATGGAGGTTTTTCTGACTGGTGATACAGTAGAATACAGTGTACCTAGAGAAGAAACGACTTTGACCAATGAGGATTGGAACTAAACATAAAATAAATAAACAGAATAATGTCATTAGTAAATGATGATAGACAGGGACTTGCTTGTGACTTTTATGATTTTATGTGATGAACTCTGTGATAGACTTGTATATATGTACACATAATATTGTAACTACATGTACTTTGTAGATTTGTAAACTTTAAATTATATCATGAATAAATTTAAATGTATC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16045	LisH_2	LisH	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006594	Conserved_site	LIS1 homology motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR39063	ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEIN HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005813	Cellular Component	centrosome	Interproscan
GO:0036064	Cellular Component	ciliary basal body	Interproscan
GO:0060287	Biological Process	epithelial cilium movement involved in determination of left/right asymmetry	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16480	OFD1; oral-facial-digital syndrome 1 protein	-	Chromosome and associated proteins	ko03036	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_8775-17.8 global RNA-seq network