Detailed information of Bpl_scaf_8148-1.12 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_8148-1.12TFIIH, POLYPEPTIDE 4Bpl_scaf_8148141182150874+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03849Tfb2Transcription factor Tfb2FamilyInterproscan
PF18307Tfb2_CTranscription factor Tfb2 (p52) C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004598FamilyTranscription factor TFIIH subunit p52/Tfb2Interproscan
IPR040662DomainTranscription factor Tfb2, C-terminal domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13152TFIIH, POLYPEPTIDE 4Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000439Cellular Componenttranscription factor TFIIH core complexInterproscan
GO:0001671Molecular FunctionATPase activator activityInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005675Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0070816Biological Processobsolete phosphorylation of RNA polymerase II C-terminal domainInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03144TFIIH4, GTF2H4, TFB2; transcription initiation factor TFIIH subunit 4-Basal transcription factors ko03022PMID: 28812709
Nucleotide excision repair ko03420PMID: 28812709
Viral carcinogenesis ko05203PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_8148-1.12 global RNA-seq network
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