Gene detail

Detailed information of Bpl_scaf_7842-2.7 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_7842-2.7	NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED	Bpl_scaf_7842	224419	240289	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_7842-2.7

GTAAATTTATCAGACCATTTGTCAGGTGTTAAGCATGTTATCTTGGTATTATCTGGGAAAGGAGGTGTTGGTAAGAGTACAGTGGCCACACAGATAGCATTAGGACTCAAAGAGAAGGGCAAAAAGGTTGGATTGCTAGATGTAGACCTTTGTGGTCCCAGTGTACCTAAAATGTTTAGTGTAGAGGGTAAAGATATTCATCAGTGTCCTGAAGGATGGTTACCAGTGTATGTCGACAAAGAACAAGAATTGGGTGTGATGTCCATAGCATTCCTGTTAGATGACAAAGATGATGCTATTGTTTGGAGAGGACCTAAAAAGTCGGCGATGATAAAACAGTTTCTGAGTGATGTAGTATGGAGAGATATTGACTATTTAATTATTGACACACCACCAGGTACTTCAGATGAACATCTTGCCGTCATAGAAAACTTAAAAGCCTACAACCCTGATGGGGCTATTCTAGTCACAACACCACAGGCTGTTGCAGTGGGAGATGTTGTTAGAGAACTTACTTTCTGTAAGAAAACACACATACCTATCATAGGTGTTATTGAAAACATGAGTGGATTTGTTTGTCCACACTGTAATGAGTGTACCAATGTGTTTTCTAAAGGAGGAGGAGAGTCTTTAGCTAAGAAGTATCATGTACCTTTCTTGGGGTGTATTCCTTTAGATCCACAGCTTACTCAGTGTTTAGAAGAGGGTAAAAGTTTTGTTGAACATTTTAAAACTTCCCATACAATGGCAGCTTTGAATAAAGTGCTAGACAAATTAATTTTGGTGGATAGAGATTTCCTCTGAGCTGCTCAGTGCCAAATTGCAAAATTGTATGGTGCTTACGAGAGATTCACCGGCATTTATACTCAAACAGAAGATATTTGAATTATAAAGGGATTTCTCAACGTGATTACACTGTTTAGAATCATTTATGTTTTCAATTGTCGGTTGTTACACTTATGATTTTAGCTTGACACTACTTGTTGTCATGGACACTTGCATATTTTTTTTCATCAACGGAATTTAAAAGTCATTGATTTAACAAGTCTGATTTTATATACAAATTTAGTATGAAATAACAGTAACAAAAATTATTAAGTTAGGCCATGCAAAGTTAATTACTTGGTTCTCAGGCCCTTTTTTGTCAAAATTGATGAGGGAGGGCGGCATTTTTTTTTATCCTTTTACTGCTGTAAAAAGTGATGAGGGAGGCATTTTTTTAAATTTTTTTGGGAAAAATATGGCAACGTATAAATCTTTTCATTACTTTATTGAAAATTTCAATTTTATTTCTTCCGATGGTGGCAGAAACATCACAAGTGGTTAATTTTTATGGAAACGTCCAATCCACTGGTCCCAACGTACCATTTTTTATCTCCGTAAACAATTCCAATAAGGTACAAGCTTCGGAGAAGCCCCCTATTATGTTTCCTGGTAAAACTGGCAAACATTTGTGCCAAATTTGCACAGAAACGATTGACATTTTGTCTAAATGTCAAACGGAAACACGTTTTTTATTTATACATTGTCATAACGATGCTTTAAATCTCATTTAAGCATGATGCGTTTTAAAGCGTTTCACCGACCACGCGATACAAGAGAAAAACGGATGCGGTTGTTTTTTCCGTATGGACAGCGCTACCGCATTTAAATTTTTTTTGTTTACTATTTTTGCAAAAAAATCGGCAATGCGGCGACGAATTTCCACATGCGGGCGGGCCTGAGAACCAAGAAATTAACTTTGTATGGCCTTATCAGTAATTAATACATATATTTACAGTCAAACCTCTCGTATGTGACCTTTCAAGTGAACACTGAAATAAGGTCAAATAATACAGGTGGTCGCTAAATACAGGTTTAATTAATATGAAATGCACTATGAAGGGAAATAAAATAAAGGTCACATAATACAAGTTATTGCTTAATAGAGGTGATCATCTAAAAGCAGGTTTGACTGTATATCAATACTGGTTCATATTATTTGGAATAATTTCTCAATGTTAAATGGATTTTTGCCAGACAATTGTATTGCGATAACTGGCATATTGCACATCTGATATTGATTGTGAAATGTAAATGCACAAATATTGTATGTAATAAGATACATAATATAAAATAGTATTACAGCTCAAATATATTTTTTAGTAATTTACATTAGAGGAAAGTTTTATTCTGCACGGCTTGCACTGGGAACAATTTGCTCAAAAACATCTGCAGATTAAATTTGTTAAGTAGCGGTAAATGTTTATATATATTTTTTTTCAGTGTTATATTTTATTTGTTGATTATTATTATTTTTATTATGAAGAAAGTCACATCAAATTTGATTTAAATTAAATTTATTTAATTTTATTCGTATCATGGATTGAAATTTTTGTTTCACTTGTATGGCCTTATTATAAATGGC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10609	ParA	NUBPL iron-transfer P-loop NTPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000808	Conserved_site	Iron-sulfur cluster carrier protein-like, conserved site	Interproscan
IPR019591	Family	Mrp/NBP35 ATP-binding protein	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR028600	Family	Cytosolic Fe-S cluster assembly factor NUBP2/Cfd1, eukaryotes	Interproscan
IPR033756	Family	Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23264	NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0016226	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0140663	Molecular Function	ATP-dependent FeS chaperone activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_7842-2.7 global RNA-seq network