Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
Bpl_scaf_7779-2.7 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED | Bpl_scaf_7779 | 207960 | 234102 | + |
CDS | |||||
Bpl_scaf_7779-2.7 | |||||
Transcript |
Bpl_scaf_7779-2.7 |
Protein |
Bpl_scaf_7779-2.7 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000504 | Domain | RNA recognition motif domain | Interproscan |
IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
IPR047201 | Domain | ERI-1-like, DEDDh 3'-5' exonuclease domain | Interproscan |
IPR050666 | Family | Epithelial Splicing Regulatory | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR13976 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000175 | Molecular Function | 3'-5'-RNA exonuclease activity | Interproscan |
GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:1990904 | Cellular Component | ribonucleoprotein complex | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
K14947 | ESRP1_2; epithelial splicing regulatory protein 1/2 | - | Spliceosome | ko03041 | PMID: 28812709 |
1. Expression trend for Bpl_scaf_7779-2.7 global RNA-seq network |