Gene detail

Detailed information of Bpl_scaf_7653-2.15 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_7653-2.15	HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED	Bpl_scaf_7653	178183	192081	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_7653-2.15

ATGCCAGCCAAATATAAAAAGATTAAGTTGCAGTTGGCAGGTCAACAAACTCTGCCTTTTGTAAGAAAAACTACAAAAGATGTTGATAATGAAAATTTAGGAAATACAAACACTGGGTCTAAGTACTGCAATCAAGTGAATCCACTGGCACTGACACCCCAACATCAGAAAAACAATCTGACACCTCTCTATCCAATCAGAAAACTGAAACTCAACAAAGGAAAATCCAGGATAGGTGGTTTAAGATATGGCCATGGCTTTACGAATCAGAAAACAAAATGTTCTGTCAGTTACATATATTTGCCAGTCATAATTCCTGACTCAAATCTTGTTTTATCAGCCAGACATTGGAACATAGATTACCTGCAAAATAACATTGGTGATGGGAAGTTTATGACATATGTATCAAACAATAAAAAGTTCAAATACTATGATGATAAAAAGTGTTCAAATGTTAAAGACTTTGTGAAGCCTATGGAACAAATTGAATTGAGTTTTAAAGACTTTGTACAGAAAATGAATAAAGGGAAATCAAAAGATCAAAGGATATATCTTCAACAGCCATTAAATGAATCAGTGGGAAAGAGAATTGTGGCAGATTTTCTGGGATTCAACTGGAATTGGGTCACATCTCAACAGAAGAAGAATAAATTTGGTCCACTGACAAATAATATGTTACTTATTGGTCAAGAAGGAAACACCACTCCAGTTCATTATGATGAGCAAGAGAATTTTTTTGCACAAGTTTATGGATACAAGAGATTTATTTTATTTCCTCCAGAAGAATTTTCCAATATGTATCCACATCCTACCTATCACCCTTGTGACAGACAAAGTCAGGTTGATTTCGATAATCCTGATTTTGAGAGATTCCCAAAGTTTAAAAATGCCAGTGGTTTTGAGGCTGTTGTTGGACCGGGGGATGTACTATTTCTTCCTATGTATTGGTGGCATCAAGTTGAATCCATTCCAAATGAAGGACATACTATTTCTGTAACATTTTGGTACAAGGGTAAGCCAACACCGGAGAAGGTTACATATCCATTGAGTGCCTCCCAGAAAGTAGCCATGTCTAGGAATATAGAGAAAATGATAGCCCAAGCTCTTAATAATACTGATGAGGTTCCAGAATTTATGCAGAATATGGTTCTCGGGAGATATACTTGAAAGATCTGACCTCAAAATGGATAGAAATCATCTGATAATATTTCATCCTTGAATGAAACAGAATAAGGTCGTGTTGTCCAAATATGGATAATTAAACTTGAAAATTAAAAAATCCTGATTAATCTGTTTGCTATAATGTTTTACCAGTACGATACAATACATTATATGCTTTAATCATAATGTTTTTGCTTAGTATTATTTTTATGACTAATTGAAATCTATATGATGGAGACATTTATTTAGGTCATCATCATTCTTTGTTTTTAGTGAAGAAAGAAACTAGGACATGATTACAGCAATTAATTGATATTTACAAAATAAATGTATAGGTATAATGGTACCACTCGTTGATTATTGACCTTAGGCCATGCAAAATTAATTACTTGGTTCTCAGGCCCTTTTTTGTCAAAATTGACAAGGGAGGGCGGCATTTTTTTTTATCCTTTTACTGCTGTAAAAAGTGATGAGGGAGGCATTTTTTTTTTTTTTTGTGAAAAATATGGCAATGTATAAATCTTTTCATTACTTTATTGAAAATTTCAATTTTATTTCTTCCGATGGTGGCAGAAATATCACAAGTGGTTAATTTTTATGGAAACGTCCAATCCGCTGGTCCCAACGTACCATTTTTTATCTCCGTAAACAATTCCAATAAGGTACAAGCTTCGGAGAAGCACCCTATTATGTTCCCTGGTAAAACTGGCAAACATTTGCGCCGAATTTGGACAAAAACGATTGACATTTTGTCTAAATGTCAAACGGAAACACGTTTTTTATTTATACATTGTCATATCGATGCTTTGAATCTCATTTAAGCATGATGCGTTTTAAAGCGTGTCAACGACCACGCGATATAAAAGAAAAAATGGATGCGTTTGTTTTTTCCGTACGGACAGCGCTACTGCATTAAATTTTTTTTTTAACTATTTTTGCAATAAAATCGGCAATGCGGCGACGAATTTCCACATGCGGGCGGGCCTGAGAACCAAGAAATTAACTTTTTATGGCCTTACATACCCTTTTATCTGTGAAGGACCTCATTGGAAATAAGCTGATGGACTTTTATGAGTTATCCTTCGTTGGCAATTATCAACATTTAATAGTTATGATATTGTTAGCTCATGTGTTAATCCTCAGTTATCTTAGATTTCCCATATACATGTACATGTATTTAGTATGTTTTGATTCAGTGAAGACACACACGGTTTTTTTCAAATAAAAGTGTTTTTTTTATTAAGGACATGTAGGACTGATATTTTACAGCTGAATAACGTTTCTTATTCTAGAAAATATTTTATGTTAGGATATTGGTTTTCATCGTCACCTTCGGCCAGGCCGTATGAGAGGGGGGTTCAACCGGTACATTGGTCCTGGGCCCGGAGAGCCAAGAATGGGCCCGTGATTCTCTGAAGGGCCCCATAGCCTTAGACGTTTTATTTTGAATTTTTCATTTTGTGGGGGATA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13621	Cupin_8	Cupin-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003347	Domain	JmjC domain	Interproscan
IPR014710	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR027452	Homologous_superfamily	Hypoxia-inducible factor 1-alpha inhibitor, domain II	Interproscan
IPR041667	Domain	Cupin-like domain 8	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12461	HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016706	Molecular Function	2-oxoglutarate-dependent dioxygenase activity	Interproscan
GO:0036139	Molecular Function	peptidyl-histidine dioxygenase activity	Interproscan
GO:0036140	Molecular Function	[protein]-asparagine 3-dioxygenase activity	Interproscan
GO:0042265	Biological Process	obsolete peptidyl-asparagine hydroxylation	Interproscan
GO:0045746	Biological Process	negative regulation of Notch signaling pathway	Interproscan
GO:0071532	Molecular Function	ankyrin repeat binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18055	HIF1AN; hypoxia-inducible factor 1-alpha inhibitor (HIF hydroxylase)	EC:1.14.11.30	Non-coding RNAs	ko03100	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_7653-2.15 global RNA-seq network