Gene detail

Detailed information of Bpl_scaf_749-3.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_749-3.8	OXYSTEROL-BINDING PROTEIN-RELATED	Bpl_scaf_749	288838	333521	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_749-3.8

ATGGCTGGATCTGGAGTTATCGAGGGTCCTCTAAGTAAATGGACCAATGTTATGAAAGGATGGCAGTATCGATGGTTTGTTCTAGACGAAGCTTCGGGTCTTCTGTCGTACTATACTTCAAAAGAGAAAATGATGAGAGGATCCAGAAGAGGATGTGTAAGATTGAAGGGTGCTATCATTGGTATAGATGATGAAGATGACAGTACCTTCACTCTATCTGTTGATCAAAAGACATTCCATTTCCAAGCTAGAGATGGTGATGAGAGAGAGAAGTGGATACAAGGATTAGAGAATGCTATACTAAGACACTCATCTGATCATCAGATAACAGATGTGCCACCCCCTACAGAAGCAGAATTTGAATATAAACTGGCAGAAACTGATGCTTATTTACAGCTAATGATAGAACAGGTCAAGAATTTAGAAACAAGAATAGATGCCTGTGAAGACGAATCTACTAGGGAACGATATAACGTCATCAAAGTCACAGCTGAGGCAACAATAGAAGCTATAAAGCATGCTATAGTGATGCTACAGATATCTAAGGAAAGTTTAAAAGGACCTGTGATGAATGGTTCCATGCATGAGAGTATCTTGACTAATGATGCTGACTTTGATTACTTTGGACCAGGTAGAAAACATGGACACCATCACTCTTCAACTTCTTCCCGCTTTAGGCGCAGCACTGTTTTGGGTGTAAATAATTCATCTATGCAGGCTTTGCCCCGTGGACACATTCGTTCTTCAGCTTCTTCCAACATAAGTCACAACAACATTATTGATGTAAATAAATTGTCTAAGCAGACTTTGCCCCTTGAAGAAGTCAATGCTCCCTCCCAGACAGATACTGTTCCAGAGAGATCGTATTCCAGCAGTGAAGAAGAAGATTTTTATGATGCTGAAGACTATAAGTCAGCAACATCAACACCACAGAAAGGTAACACCCCAGTGACAACACCTACCTCAGAAGAAGATAAAACAATAGAACAGCCACAAGTAATAGCTTCAGATGATGACTATTATGATGAGCTTTATGATGAATTAGACAATGAGAATTTGGGATCATTAGAAAAGCATGGTAGCATAATTGCTCATTTGTTGTCACAAGTTAGAATAGGAATGGATTTAACTAAAGTAGTTTTACCAACATTTATCTTGGAGAGAAGATCTCTGTTAGAAATGTATGCTGACTTTTTTGCTCACCCAGATTTATTTTTAAAAATTCCTGATTTTGAAACTCCCAAAGACAGAATGGTACAATTAGTACGGTGGTATTTATCAGCATTCCATGCCGGCAGAAATAGTGAAATAGCCAAAAAACCATATAACCCTATACTAGGAGAAACCTTTACATGTTTCTGGAAATTACCAGGAAATGAACATAGTGGTGTTAGTGAAAACAGTGGAGAATTAACAGAGGAAGGTCCTGTGCCTTGGGCAGGTAAAGATAATCTGGTATTTGTTGCTGAACAAGTATCTCATCATCCCCCAATTTCAGCATTTTATGCAGAACATTTTAATAAAAAGATATCATTAGATGGTTATATATGGACTAAATCAAAATTTCTGGGGCTGTCTATTGGTGTACATTTGATAGGACAAGCTGTAATATCTGTGATAGATTATGATGAAGAATATACTATAACATTCCCTAACGGTTATGGAAGATCAATTTTAACTGTTCCGTGGATAGAATTGGGTGGAAAAATAAATATTAATTGTGCTAAAACAGGTTACAGTGCTAATATAGAATTTCATACTAAGCCATTTTATGGAGGAAAGAAACACAAAGTGACCTCAGAAATTTATGAACCAAATGAAAAGAAACCTTTTGTTAATATAGATGGTGAATGGAATGGAGTGATGTATGCTAAATATACAACTGGTATGAATGAAGTATTTGTAGATACAAAGAAAATGCCAATAATGAAGAAATTAGTAAAGCCAACAGACCAACAGACAGAATTTGAATCTAGAAGGTTATGGAAAGAGGTAACATATAACCTTAAATACAAGAACATTGAGGAGGCAACAAACCATAAACAGAGGTTAGAACAAAGACAGAGGAATGAAGCGAAGGAAAGAAAAGAGAAGGGACTGAAAGTTGAAACAAAGTGTTTTCACGAGGAAGGAGAACATTGGGTATATGATAGACCATTATTAAAGAGAGTCAAAAGTACTCTGTGA

Transcript

Bpl_scaf_749-3.8

TTCCGGTCTAGTCGAAGATGGCTGGATCTGGAGTTATCGAGGGTCCTCTAAGTAAATGGACCAATGTTATGAAAGGATGGCAGTATCGATGGTTTGTTCTAGACGAAGCTTCGGGTCTTCTGTCGTACTATACTTCAAAAGAGAAAATGATGAGAGGATCCAGAAGAGGATGTGTAAGATTGAAGGGTGCTATCATTGGTATAGATGATGAAGATGACAGTACCTTCACTCTATCTGTTGATCAAAAGACATTCCATTTCCAAGCTAGAGATGGTGATGAGAGAGAGAAGTGGATACAAGGATTAGAGAATGCTATACTAAGACACTCATCTGATCATCAGATAACAGATGTGCCACCCCCTACAGAAGCAGAATTTGAATATAAACTGGCAGAAACTGATGCTTATTTACAGCTAATGATAGAACAGGTCAAGAATTTAGAAACAAGAATAGATGCCTGTGAAGACGAATCTACTAGGGAACGATATAACGTCATCAAAGTCACAGCTGAGGCAACAATAGAAGCTATAAAGCATGCTATAGTGATGCTACAGATATCTAAGGAAAGTTTAAAAGGACCTGTGATGAATGGTTCCATGCATGAGAGTATCTTGACTAATGATGCTGACTTTGATTACTTTGGACCAGGTAGAAAACATGGACACCATCACTCTTCAACTTCTTCCCGCTTTAGGCGCAGCACTGTTTTGGGTGTAAATAATTCATCTATGCAGGCTTTGCCCCGTGGACACATTCGTTCTTCAGCTTCTTCCAACATAAGTCACAACAACATTATTGATGTAAATAAATTGTCTAAGCAGACTTTGCCCCTTGAAGAAGTCAATGCTCCCTCCCAGACAGATACTGTTCCAGAGAGATCGTATTCCAGCAGTGAAGAAGAAGATTTTTATGATGCTGAAGACTATAAGTCAGCAACATCAACACCACAGAAAGGTAACACCCCAGTGACAACACCTACCTCAGAAGAAGATAAAACAATAGAACAGCCACAAGTAATAGCTTCAGATGATGACTATTATGATGAGCTTTATGATGAATTAGACAATGAGAATTTGGGATCATTAGAAAAGCATGGTAGCATAATTGCTCATTTGTTGTCACAAGTTAGAATAGGAATGGATTTAACTAAAGTAGTTTTACCAACATTTATCTTGGAGAGAAGATCTCTGTTAGAAATGTATGCTGACTTTTTTGCTCACCCAGATTTATTTTTAAAAATTCCTGATTTTGAAACTCCCAAAGACAGAATGGTACAATTAGTACGGTGGTATTTATCAGCATTCCATGCCGGCAGAAATAGTGAAATAGCCAAAAAACCATATAACCCTATACTAGGAGAAACCTTTACATGTTTCTGGAAATTACCAGGAAATGAACATAGTGGTGTTAGTGAAAACAGTGGAGAATTAACAGAGGAAGGTCCTGTGCCTTGGGCAGGTAAAGATAATCTGGTATTTGTTGCTGAACAAGTATCTCATCATCCCCCAATTTCAGCATTTTATGCAGAACATTTTAATAAAAAGATATCATTAGATGGTTATATATGGACTAAATCAAAATTTCTGGGGCTGTCTATTGGTGTACATTTGATAGGACAAGCTGTAATATCTGTGATAGATTATGATGAAGAATATACTATAACATTCCCTAACGGTTATGGAAGATCAATTTTAACTGTTCCGTGGATAGAATTGGGTGGAAAAATAAATATTAATTGTGCTAAAACAGGTTACAGTGCTAATATAGAATTTCATACTAAGCCATTTTATGGAGGAAAGAAACACAAAGTGACCTCAGAAATTTATGAACCAAATGAAAAGAAACCTTTTGTTAATATAGATGGTGAATGGAATGGAGTGATGTATGCTAAATATACAACTGGTATGAATGAAGTATTTGTAGATACAAAGAAAATGCCAATAATGAAGAAATTAGTAAAGCCAACAGACCAACAGACAGAATTTGAATCTAGAAGGTTATGGAAAGAGGTAACATATAACCTTAAATACAAGAACATTGAGGAGGCAACAAACCATAAACAGAGGTTAGAACAAAGACAGAGGAATGAAGCGAAGGAAAGAAAAGAGAAGGGACTGAAAGTTGAAACAAAGTGTTTTCACGAGGAAGGAGAACATTGGGTATATGATAGACCATTATTAAAGAGAGTCAAAAGTACTCTGTGATTATATGTAAACATAGTATACAGACCGTGAGGACAACATGCTCCAACATGCTACTCACTGATTTAGATCTGAATATTTCTCTTCTTAACAACATTGATAGATATGCAGATTTAGATTAGAATTATTATTTCCTGAGATTTTCTATAGTGAACAATGAATGACACTGTAAGCAATTTTATTCTCATGATATGCTTGTTTTATTTTTATTTTTTTTTAAATACATTTCTTGGTACTTTTCTCATGTTTTATAAGAATAACAATTTATGGGTTCTTAAAGTGATAGATGCCAAAGTTTGATTTGATATGAAATAATGTAATTTTTAGTTCGAGAAATCATTTTATCAGCCTGGTTTAGTATTATTCACAAGAAATTAAAATATTAATGCTTTTATTTTTTTATTAATTATTTTATGAATCAAGGAAAGGGTGTGTCTTATATATCAATGCTTACTAAACACTTCTAATTATGGTGAACTACAAAAGTAACATGTGTAGATCATGTGTGCCATTTTTTGTTATTATTTAAAGTTGTCATAATTCCCAAAGTTATTGATATATTAAGAATGTCTTTAAATCAATGATTATTAAATTTATAGATTGATTGTTCCACAAAATCATGGAAACACCCGGAATTGCAAATATTTGTCATATTGGATTTTTTTTTAATCCTGAACACTTATTTCTATTCCCCAAATAGTATATGGACAATTCTTGAGTTATGGTAAGAAAGTATTGGCATTTTACTGGCATTTTTTTAATACAAATTAATACTGGCATTATCAAGCTGGTTAAATTTACTTTTCAGAGCTATATTCTTTACCGCAAGAAAAAATATTCAGTATTAAACTGCATTGAATGTATGTTGATTAACTTTAGCCAAAATTTGTAAGAATTAAAGATTAATTCTATTTATTCTAACTTTCTCTGTAGTCAAGTTTGTAAAAAAATAATTATTGGTCGTTTGCAAAGACATGGTTATGTTGCCTCTATCCCATTGACAAATTAAACAACCAAGTTTAAAAGGGGCCTTAACTCTGATGGATACATGGAAATCTAAAAATATAAATTTCTATTAATATGAAATTGGAGGTACACATCAGTAAGGTATGAGAAGGCAGGTGGTATAAATTTAAATTCTACCAATGACCACAGGTGACACAATTATTGTACAATTATTAGTAGATATTGCCCCTAATAATGTTATAATGATCTCATGTATAACCAAAAATAAAGTAGTGTCAATTAGAAATTTGAAATGTACAGCATAATTTTGTTTCAAAATTAATTTGAGCATTGTATGTTAATGATAATGATATTAAATTTTGTCTTACTAAATGTTTGTTTATTTGGTAATCACCATTAAATCAATATTATATTAGATATAATAACACATTATATAGAAAAACAGTACATCCTTGTTATACCGCAACCTTTTGAACTTCTATGATTTTGGGGATAAGTGAGGGTTGCTATATATCAAGAGAGAAAACTACATGAATTTTGGACATTACACTTGGATGATATTGAGGGTGGTGGATTAAAGAGCTGTAACAAGGGTACACTGGACCAATTTGATAAATAATCATTTATTACATTAGGATACACTTCTGTCATATCAGTTGGATTTGTTTTGATAAAGATGTCATTTAATATTCATTACTATGCAATACATATATTTATTTAGTGTAAACTATATTTTATTTGAAAGAAAGTCAAACACAAATATATTTATTTATCAACCATCCGTCAAGGTTCATACATTATGTTACACAAGGTCACAATTACATTGACATAACAGTTGACTGCTTTATATATATACCTTGTATGGTTATTATGAACTGTGATAATATAATCAATTATAAAATGTTGAGTTGTTGACTATTTATGAAATTACTTGTATATTAATTTTCTCGACTGTATGCTGATGGTGTTTACTGCAAAGTGCCAAAATATTGTCACTGGTTTGTCATCTATTAATTTTCCCATTTCAAGCCCTTTTTCACAAAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00169	PH	PH domain	Domain	Interproscan
PF01237	Oxysterol_BP	Oxysterol-binding protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000648	Family	Oxysterol-binding protein	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR018494	Conserved_site	Oxysterol-binding protein, conserved site	Interproscan
IPR037239	Homologous_superfamily	Oxysterol-binding protein superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10972	OXYSTEROL-BINDING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0008289	Molecular Function	lipid binding	Interproscan
GO:0015248	Molecular Function	obsolete sterol transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0032934	Molecular Function	sterol binding	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_749-3.8 global RNA-seq network