Gene detail

Detailed information of Bpl_scaf_7318-2.9 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_7318-2.9	ANKYRIN REPEAT, SAM AND BASIC LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN 1	Bpl_scaf_7318	160407	189186	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_7318-2.9

CTATATACACCCGCAACAGAATCCTAGCAGTACTCCTTCAGTAGAATAAATTTCTTTTGAACGGGAACTTACTTTGAAATAAAAGTCAGTGGTGTAGGCCTAATCTTTTCACTGTTAACGTATTTGCCATAACATCGTACATTGGACTCTTGTTTCCACCCAGCCGTATCAACTTTCACATGGCGAATCCAATGATGAACTTTTCACCCGGTGGAGCCGAAGACGATTTTGATGATGAGGACGACGATGGATTTGTACTGGGTTGCGACAACCACTTGAATAACAGCGATGCAGATCATTGGACCCAACAAAATAACTCGACAAACAATGCTACAACCAGTGATTTCAATCGAGGAGGGTTTGGTATACCTACAAAAAAATCCACAAAGAAGCCTCAACCAGAAAAAACAAATCTAAAGCCTTCAGTAAATAAAAAAATGGGTGTGGATGATTTCAGAATGGCCATTAATAGAGGATGCATTGAAGTGGTTAAAGAATCTGTTAATAATGGTTTTAATGTAAATAATGTGTTGAAGTGTGGTTGGACAGGATTAATGTATGCAGCAAATTCAGCAAATAAAGAGATTGTAGATTTTCTAGTTACTAAAGGAGCCAATGTCAACAGTAATAATGATATGTTTAATGTACTAATGGCAGCCTGTTCATCAACTAGTAGTAACCAAGAAGATATACTATCATGTGTAACAGTTCTAATTAATGGTGGAGCAGATGTTAACAGTCATGACAGGTACCACTTGTCGCCATTGATATATGCGGCTAGAGAAGGGAGAGAACTAGTGGTATCAAAGTTATTAGATTGTGGTGCAAATATACACAAACAAGATAGTAGAGGATGGTCGGCATTGAGTTGGTCTGTTAGCAAGAACCGTGTCAAAGTAGTGAAGGTTTTAATTGAACGTGGTATTGATGTTAATATGAAACATTGTGATGGACAGACAGCCCTCGATGTAGCTGTAGCACAACAGTATGAGGAACTGATAACATTGCTTGGTGGTGAATCAAAAACTAAAATATCAGCAGTAGCTACAAGTACAAAAGAACATCCCATGTGTAATGGTAGTATTGATGACGGAGACATTGATGAAACACAATCTGTAGTGAAGTATGGAGAACTAGAACTATTTTTGTGTGGTTTAGATTTAAGTGATTATGTAAACTTGTTTCAACAACAACATGTAGATTTCTCTATCATAATGAGAATGACAGATGAAGATTTGATCAAGATGGGAATACATAAGATAGGAGTTAGGAAAAAGATATTGGATGGAATAAATAATGTACATAAAAAGGAGTGGGAAACAACAAGTCTGCCTCTGTCACAGTACAACAAACAACTTAGCTGTGCAGAATCTGTAGCTATGGTTATTAATATGAGCAAACATTGTAAATATATTGGAGCAACGACAGGATATATGAGGGACCAAATACTGAAACATCCAGACATTCTAGATGTACAGCAATTAAAGAAAAAAGACTACAAGCCACCAGATCTTATCTCGTTCAAGAAAAGGAAGAGTGGATTCAAAAAGAAACAAATTTTTGGTTTAATTTGTGTGATATCTGTAACTGCCACAGTTTTATGGAAAAGAGAACTTATAATGAACTATGTAACACATATAAAGACATCAATAGATACATAAATCTTATGACTGCAAAATATTTTACCAGATACAAAAACTGAAAATAAAACACAAAACAACATGGACCTGTTTGGTCAAAGTTCCTGTTAGTAATGTGAAATGTTAGTTCCATACTTATGACATTACTGTATTTATGCTTTGCCAACATCAATCAATAATTTTAATGTTGCAAAATGAGTTTACCTAACAACACTTGACAGATCTAGGTGAACAGATACATTTGTATTTGCAACAGTAAAACCAAGATTGATGTCAACAATGCTTAAATTACAGTTTAAATACAATCAACGGTAACCCTTGGAATAAAGCGAAAATGTCAGCATACTAGATCGATCAATCTAGATTGTTTAATCCGGTCTGTAATAATTTGTGCAGTACCATTACCAGAAGGTAATTTTTGGAAAAAGTGGAGGTTGCTTTACAATGCTGTGTTTTTGTATTGATTTACAGTTAATTATACAGTAATTTGAGAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07647	SAM_2	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001660	Domain	Sterile alpha motif domain	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR013761	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR042650	Domain	ASZ1, SAM domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24157	ANKYRIN REPEAT, SAM AND BASIC LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0034587	Biological Process	piRNA processing	Interproscan
GO:0071546	Cellular Component	pi-body	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18410	ASZ1, GASZ; ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1	-	Chromosome and associated proteins	ko03036	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_7318-2.9 global RNA-seq network