Detailed information of Bpl_scaf_7091-1.9 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_7091-1.9RIBONUCLEASEBpl_scaf_709186802172317+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00044Gp_dh_NGlyceraldehyde 3-phosphate dehydrogenase, NAD binding domainDomainInterproscan
PF00773RNBRNB domainDomainInterproscan
PF02800Gp_dh_CGlyceraldehyde 3-phosphate dehydrogenase, C-terminal domainDomainInterproscan
PF17216Rrp44_CSD1Rrp44-like cold shock domainDomainInterproscan
PF17849OB_Dis3Dis3-like cold-shock domain 2 (CSD2)DomainInterproscan
PF17877Dis3l2_C_termDIS3-like exonuclease 2 C terminalDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001900DomainRibonuclease II/RInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR020828DomainGlyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domainInterproscan
IPR020829DomainGlyceraldehyde 3-phosphate dehydrogenase, catalytic domainInterproscan
IPR020830Active_siteGlyceraldehyde 3-phosphate dehydrogenase, active siteInterproscan
IPR020831FamilyGlyceraldehyde/Erythrose phosphate dehydrogenase familyInterproscan
IPR022966Conserved_siteRibonuclease II/R, conserved siteInterproscan
IPR028591FamilyDIS3-like exonuclease 2Interproscan
IPR033771DomainRrp44-like cold shock domainInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR041093DomainDIS3-like exonuclease 2, C-terminalInterproscan
IPR041505DomainDis3-like cold-shock domain 2Interproscan
IPR050180FamilyRNR RibonucleaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23355RIBONUCLEASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan
GO:0010587Biological ProcessmiRNA catabolic processInterproscan
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0034427Biological Processobsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'Interproscan
GO:0051287Molecular FunctionNAD bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18758DIS3L2; DIS3-like exonuclease 2EC:3.1.13.-
Messenger RNA biogenesisko03019PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_7091-1.9 global RNA-seq network
TOP