| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_702-0.8 | NUCLEAR PORE GLYCOPROTEIN P62-RELATED | Bpl_scaf_702 | 39987 | 56384 | + |
| CDS | |||||
| Bpl_scaf_702-0.8 | |||||
| Transcript |
| Bpl_scaf_702-0.8 |
| Protein |
| Bpl_scaf_702-0.8 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05064 | Nsp1_C | Nsp1-like C-terminal region | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007758 | Domain | Nucleoporin, NSP1-like, C-terminal | Interproscan |
| IPR026010 | Family | Nucleoporin NSP1/NUP62 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12084 | NUCLEAR PORE GLYCOPROTEIN P62-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005543 | Molecular Function | phospholipid binding | Interproscan |
| GO:0005643 | Cellular Component | nuclear pore | Interproscan |
| GO:0006405 | Biological Process | RNA export from nucleus | Interproscan |
| GO:0006606 | Biological Process | protein import into nucleus | Interproscan |
| GO:0017056 | Molecular Function | structural constituent of nuclear pore | Interproscan |
| GO:0044613 | Cellular Component | nuclear pore central transport channel | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14306 | NUP62, NSP1; nuclear pore complex protein Nup62 | - | RNA transport | ko03013 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_702-0.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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