| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_6694-0.3 | ALPHA CATENIN | Bpl_scaf_6694 | 1381 | 33469 | + |
| CDS | |||||
| Bpl_scaf_6694-0.3 | |||||
| Transcript |
| Bpl_scaf_6694-0.3 |
| Protein |
| Bpl_scaf_6694-0.3 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01044 | Vinculin | Vinculin family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001033 | Family | Alpha-catenin | Interproscan |
| IPR006077 | Family | Vinculin/alpha-catenin | Interproscan |
| IPR036723 | Homologous_superfamily | Alpha-catenin/vinculin-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR18914 | ALPHA CATENIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005912 | Cellular Component | adherens junction | Interproscan |
| GO:0007155 | Biological Process | cell adhesion | Interproscan |
| GO:0008013 | Molecular Function | beta-catenin binding | Interproscan |
| GO:0016342 | Cellular Component | catenin complex | Interproscan |
| GO:0016477 | Biological Process | cell migration | Interproscan |
| GO:0045296 | Molecular Function | cadherin binding | Interproscan |
| GO:0051015 | Molecular Function | actin filament binding | Interproscan |
| GO:0098609 | Biological Process | cell-cell adhesion | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K05691 | CTNNA; catenin alpha | - | Hippo signaling pathway | ko04390 | PMID: 28812709 |
| Adherens junction | ko04520 | PMID: 28812709 | |||
| Leukocyte transendothelial migration | ko04670 | PMID: 28812709 | |||
| Pathways in cancer | ko05200 | PMID: 28812709 | |||
| Endometrial cancer | ko05213 | PMID: 28812709 | |||
| Arrhythmogenic right ventricular cardiomyopathy (ARVC) | ko05412 | PMID: 28812709 | |||
| Bacterial invasion of epithelial cells | ko05100 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_6694-0.3 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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