| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_65428-2.4 | AMPLIFIED IN BREAST CANCER 2-RELATED | Bpl_scaf_65428 | 155713 | 184721 | + |
| CDS | |||||
| Bpl_scaf_65428-2.4 | |||||
| Transcript |
| Bpl_scaf_65428-2.4 |
| Protein |
| Bpl_scaf_65428-2.4 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10220 | Smg8_Smg9 | Smg8_Smg9 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019354 | Family | Nonsense-mediated mRNA decay factor SMG8-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13091 | AMPLIFIED IN BREAST CANCER 2-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000184 | Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K18734 | SMG8; protein SMG8 | - | Messenger RNA biogenesis | ko03019 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_65428-2.4 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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