Gene detail

Detailed information of Bpl_scaf_64961-3.14 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_64961-3.14	TYROSINE-PROTEIN KINASE RECEPTOR	Bpl_scaf_64961	342034	359949	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_64961-3.14

ATTTCGTGTTCACGGTTAATGAACAAGTCAAGTTGTGAGACTAAATGTGGGTTAGGTACAGCGGCAGGACATTGTGTTTGGCGACAGGGTAGTGGTGTTGGCATAGTGTCCAAATATTCCACATGTACTCCAAATCTTAACACGTGTCCGAATAACGTTTGTGATTCGTTAGAACTTGCATATCCTTCTCTGTGTCCACAGGATTGTACAAAAACAATTACAGGAACGGGCCAAATAAATAAAGAATCAGGAAGAGGCATATTGAGGGGTTTAAGTCAATGCTGGTGTGACTATAATCAACATTGCTACTGCTTTGATAAATATACCATCAAATCTACGACACCATCAAATGCAGTTCACTATGGCAACCAGTCACATGTTGGTAATAATAATGGTAAAGACAAGAACAATACAGTAGCCAACGTTCATGTAGATCCAGTATTAGACGGTATGTCATTAGTTAAGCTTGGGGTGTTAACTAACAAATGGCTTGAATCTCCAGAAGATGCTAAATGGGAGATTGATAGAGAGCATTTACAATTAGACAACACACTAGGAGAGGGAGAATTTGGAAAAGTAGTTAAAGCTAAAGCCTTCAACATTGATGGGAAACAGACCTATACTGATGTAGCTGTCAAAATGTTGAAAAATTGTGCCTCCAACGTTGAGCAACAAGCACTGTGGTCCGAGTTCAATCTACTTAAAGATGTACAACACCCTAATGTCATACGATTGTTAGGAGCATGTACACAACATGGTCCTACATTTGTGATAGTAGAATATTGTGAACATGGTTCATTATTATGCTATCTACGAAACTCCAGACTCGAGGAAAATGGTTACGTGAATCAACGATACAAACCGTCAAGACATTTGTCCAATCAGCAACGGGAACCACCTGAATTGCTGACCATACGCGATTTACTGTCATTTGCTTGGCAAACAGCTAAGGGGATGCATGTTTCTCTATTTTTTAAGCTTGTTCATAGAGATCTAGCAGCTAGAAATGTTCTTGTTGGTTCAGGAAAGGTCCTAAAAATATCTGATTTTGGTTTAACAAGAGATGTTTATGAGGCAGATACATATCTAAAACAGAGTAAGGTACGTTATGGCTCTATGTCGTTATATAAAGGCATGTGATGGTCATTTGGTATCGTTTTATGGGAAATTGTAACGTTAGGAGCCCCACCATATCCGGGCGTGCCCCCAGAACGTCTGTATAATCTGTTACTAGCTGGTTATCGTATGGACAGACCTGAGAATTGTTCTGACGAATTATATGCTGTGATGCAAAAATGTTGGAAAACGGATCCACAAGACCGACCGACATTTTCAAAACTTGCAGAAATATTTGACAGAATGTTGCAGCAAAGAACGGAATACCTTGAACTGACAGGTGGTTTTGATGATGACACTTCCGATTTGTTTGGCAGTCGGTATGCCCCTTCTGTGTCGGGCATTTCTGTAATTGGAAGACAACCTTTACACGTACATTCCGAAAATACACTTACAGGTTCTAGAAATAGTTGCAGTTCATACCTGACTCCAGCTTCAACAAATACCGTTGATTCGAACTCTTGTTTATCAGACGTTACGTCCTCAAAACGTGATCCTAGTAATATGTCAGAAATGTCATCACTATTGTCTGACAGCGTTGGTGGAAAGAATCCTTTTGTTAATGAATCAATGGTGAAAAGTAGAGCCGAACAGACGGTTGTGTAAAAATGAATATATTGTGATGTGTACATAATATGTATTAATGGTCTAGTCAAAACATTAGAGTCCTCTCCTGTGATTAGAATTTTTATATTTATTACAAGTGACATAATAATTATGCAATTAATTTAAAATTGTTTGTTGAGTAATTAATATTTCTAAGGACAATGAAAAGTGGGGATAACTCCAATATATAACCTATAAAGGCAAGAGATCAGCATTTAGGGTAATGGAATATAATTATTTATGTTATATTACTTGTACATAAACATTTAGCAGGGTCAGTCGTGTGGTCAGGATCGTATGATAGTTGGAGTTACAACTACCTGTGCAATCAGTTCCTTTCACCACTAAAGTTGTGAGTTCGAATCTTTCTCATGGCGAGGTGTACTCGATACATTATGTGATAAAGTTTGCCAGTTACTTGCGACAGGTCGGTAGTTTTCTTCGGGTACTCCAGTTTTCTCTGCCACGATATAATTGAAATATTGTTAAAAGTTGCACTAAATACCATAAACCAGACCAATTACACTCTTGAACTCTCTCATGGTCATCAACAAACAATAACTCTTAATGAGCAATGTAAGCTGCTACCAGTTGTTTTTAATTTCCAAATATGTCTAGGGTCTAACCTAGAAAACTCGTACATGTCTTTGTGTGTAAATATTGTAAATAACAACCGGGATATATATATATATATATAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0030424	Cellular Component	axon	Interproscan
GO:0033674	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05126	RET; proto-oncogene tyrosine-protein kinase Ret	EC:2.7.10.1	Endocytosis	ko04144	PMID: 28812709
			Pathways in cancer	ko05200	PMID: 28812709
			Central carbon metabolism in cancer	ko05230	PMID: 28812709
			Thyroid cancer	ko05216	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_64961-3.14 global RNA-seq network