Detailed information of Bpl_scaf_64925-2.28 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_64925-2.28ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 3Bpl_scaf_64925263135276753+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
----------

InterPro
InterPro termTypeDescriptionSource
IPR032854FamilyAlkylated DNA repair protein alkB homologue 3Interproscan
IPR037151Homologous_superfamilyAlpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR31212ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 3Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006307Biological ProcessDNA alkylation repairInterproscan
GO:0035552Biological Processobsolete oxidative single-stranded DNA demethylationInterproscan
GO:0051213Molecular Functiondioxygenase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10860ALKBH3, DEPC1; mRNA N1-methyladenine demethylaseEC:1.14.11.54
DNA repair and recombination proteinsko03400PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_64925-2.28 global RNA-seq network
TOP