Gene detail

Detailed information of Bpl_scaf_64890-2.15 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_64890-2.15	METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN	Bpl_scaf_64890	223303	247517	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_64890-2.15

ATGGCGGAGACTGGTGCGAGTGAATCTAGTAGTCCAGATACAGACAAAGACTTTGATCCTACAGCTGATATGCTTGTTCATGATTATGATGATGAACAGACATTGGAAGAAGAAGAAAACATGAGTGGTGACAGCTGTAGTAATGAATTAGATGACTTACAAAAGGAAGGTGATATGCCACTGACAGATTTACTGAGTATGTATGGGTATGGTAATGGAGGCGTCAGCAGTGAACAACAAGACACGAGATCTAGTAGTGAAGAAGAAATTCTTAGTAATCAGGATCTGACTTTAGATAAAGATGAAATTGCTAGAGACTTATTGAAAAACAGTGATGACGATGATGACAAAGAAACCGATGTACATGATCTGATCAATAGTGTATCGCACACAGCCAGATTACTGAGATCGGCTAGTCAACCTGGTAGTGATGATGAGGATGACTCTGATGAAGATGATTATGAACCAAATGAAATTCCTGAAGATGACTGGAAAAAGACAATACAAGTTGGACATGATTACCAAGCAACTGTACCAGATGGCCTTTGTAAATATGGTGATGCACCAGCCTATGAAAATGAGGACAGATTGTTGTGGGATCCTGATAAGCTTGAGGATTCTGTAGTTGAAAATTATTTAAACGAAATCCACAGCCAGGCATTACAAGCAGCGACAGGTGTAAATGCTATTCCTACTGGTGCTCATATTCGTGATGATGAACAGGCTTTGTACATGTTACTGCAATGTGGACATAATGTGGAAGAAGCATTAAGAAGAAGGAAGATGCAAGCAATACCTCCAACAGATACAATGAGTTTATGGTCTGAAGAAGAGTGTCGGAACTTTGAAAATGGTCTACGTGTGTATGGCAAAGACTTCTATCTAATACAGCAAAATAGGGTAAAAACTAGATCAGTTGGGGAATTAGTGCAATTTTATTATTTATGGAAGAAAACAGAAAGACATGATGTCTTTGCCAACAAAAATAGGCTAGAAAAGAGAAAATATATTCTACATCCTGGTATAACAGATTACATGGACAGATTTGATGATCAAGAAAGTCCAGCACCTCCAGCAAATAGAGAAAGATCTGCTAGTCCAGTAACATGCTTACTTTATGGTGATCCTAAAAGAAATTCTTTGAAACCTTCCGGTGAGAGTAACACTCCAAGTACAACAAGTGAATCTAAAGAATTTGATCTCAGTTCAGCAATGCCTACAGTCTCAGGAATTAGTCCTGATTTAAAAAGACGAAGTTCTTCTCCCAAAAACACTCAAAATACTAGTATTAATGGTTTACACGAAGAAGTGTCGTTAGAACCCCCTGTGAATAAAAAATTGAAAAAAGAAACTGATGTACCTCATTATGGACTTGAGGAAAGTTATTCAGACACGACTCATGTGGATGAAAAAAAATGTGCATCGTTAACGCCAGGTCATCATATAGGAGACAGTATTAGTAGCTCATCATTATCATGGAAGTCATCAGAATCAATTGTTTAGTTATTGTTAGTTTTTTTGTTTATTAAAGATTATTATATAAATTAATTATATGCCTTGTTTCATGACAAAATCTGTATGCAAATATCATCTAGGAATACTCATATCATTCATCTGTCATTTAAATTTGATCAAATAAATGTTGTTGGTTTTTTTTTAGAAGTTGACTTTTTGGGGTTTTTGTTTTATTTTAAGGTATTTAGGATGTTCTTCATATAAATAATACAGATGATCACATGATCCCTAAATTATTTTAGTGTGTAATTTCTTCCAGGAAATATAAGATCAAAGGATAATAAACTTTTAGCATTGCACATCACCATGCTGCCCTCACAATGGAAATAATGTCTATACTCTTGTCCTGTCCAATTTTGTGAAATTATAACATTATTTCAATATATTATTATTATTGTAGTAGTAAAAGAAAAGTATTGTTATCAATAAAAAAAATAATGTTAACATTGATAATATCTGACAATTAATTTTTAAAAAGTGCCCTCTGAGAGCATACATGGCCTGTCTTTCTGAATTTCTTTGGAAAACACTTTTAAGCATTGTAAATAAACATGGGGGTGATTATAGTGAATAGTGAATATAGTCAAAAGAATATCAGATCGAGTCCCTACTGATCTTTAACAAGTCCCAGCAGTATAAATAGATAGATAAAAATACCTAGCATGAAATATAACTAATATGATTTCATGTTCTTTTATATCATCAACTTAGAAGTTTTCATTTTAAACCTTGAATATAATGTTAGAACCTAGATATACATTTTTCTACCATTTGATATAAATATTTTATGGCCA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01448	ELM2	ELM2 domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000949	Domain	ELM2 domain	Interproscan
IPR001005	Domain	SANT/Myb domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR017884	Domain	SANT domain	Interproscan
IPR040138	Family	Mesoderm induction early response protein/metastasis-associated protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10865	METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0003714	Molecular Function	transcription corepressor activity	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0016575	Biological Process	obsolete histone deacetylation	Interproscan
GO:0042826	Molecular Function	histone deacetylase binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_64890-2.15 global RNA-seq network