| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_64871-1.7 | B-BOX DOMAIN CONTAINING | Bpl_scaf_64871 | 122905 | 143309 | + |
| CDS | |||||
| Bpl_scaf_64871-1.7 | |||||
| Transcript |
| Bpl_scaf_64871-1.7 |
| Protein |
| Bpl_scaf_64871-1.7 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00643 | zf-B_box | B-box zinc finger | Domain | Interproscan |
| PF13920 | zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000315 | Domain | B-box-type zinc finger | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR003961 | Domain | Fibronectin type III | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR036116 | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR051051 | Family | E3 ubiquitin-protein ligase TRIM/RNF | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR25465 | B-BOX DOMAIN CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K08285 | TRIM18, MID1; midline 1 | EC:2.3.2.27 | Ubiquitin mediated proteolysis | ko04120 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_64871-1.7 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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