| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_64807-4.6 | TIP120 | Bpl_scaf_64807 | 400722 | 448704 | - |
| CDS | |||||
| Bpl_scaf_64807-4.6 | |||||
| Transcript |
| Bpl_scaf_64807-4.6 |
| Protein |
| Bpl_scaf_64807-4.6 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08623 | TIP120 | TATA-binding protein interacting (TIP20) | Repeat | Interproscan |
| PF13513 | HEAT_EZ | HEAT-like repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR013932 | Domain | TATA-binding protein interacting (TIP20) | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR039852 | Family | Cullin-associated NEDD8-dissociated protein 1/2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12696 | TIP120 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0010265 | Biological Process | SCF complex assembly | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K17263 | CAND1, TIP120A; cullin-associated NEDD8-dissociated protein 1 | - | Ubiquitin system | ko04121 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_64807-4.6 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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