Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
Bpl_scaf_64483-4.15 | IP01054P | Bpl_scaf_64483 | 399265 | 404154 | + |
CDS | |||||
Bpl_scaf_64483-4.15 | |||||
Transcript |
Bpl_scaf_64483-4.15 |
Protein |
Bpl_scaf_64483-4.15 |
Gene family | Subfamily |
---|---|
Transcription Factors Family | Homeobox |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00046 | Homeodomain | Homeodomain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR001356 | Domain | Homeobox domain | Interproscan |
IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
IPR017970 | Conserved_site | Homeobox, conserved site | Interproscan |
IPR020479 | Domain | Homeobox domain, metazoa | Interproscan |
IPR042247 | Family | T-cell leukemia homeobox protein 1/2/3 | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR45921 | IP01054P | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000978 | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
GO:0000981 | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
GO:0003677 | Molecular Function | DNA binding | Interproscan |
GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
GO:0005634 | Cellular Component | nucleus | Interproscan |
GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
GO:0048513 | Biological Process | animal organ development | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
K15607 | TLX3, HOX11L2; T-cell leukemia homeobox protein 3 | - | Transcriptional misregulation in cancers | ko05202 | PMID: 28812709 |
1. Expression trend for Bpl_scaf_64483-4.15 global RNA-seq network |