Detailed information of Bpl_scaf_64229-2.16 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_64229-2.16SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINBpl_scaf_64229253338325413-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018SH3_1SH3 domainDomainInterproscan
PF00036EF-hand_1EF handDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001452DomainSH3 domainInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR035825DomainAlpha Spectrin, SH3 domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06114SPTA; spectrin alpha-Apoptosis ko04210PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_64229-2.16 global RNA-seq network
TOP