Gene detail

Detailed information of Bpl_scaf_64138-7.22 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_64138-7.22	PLEXIN	Bpl_scaf_64138	655935	685936	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_64138-7.22

ATGGTTTTTCCTGTACCTGGACCAGAAAGTGGTGATGATGTAAAAATAACAATTTATGGGAAAAACATAGGAAATCCAAACGACAATATAACAGTAGAGATTTATGGTGTAGAGTGTACTAATATAGAAGTCTTAAGACCTTCTTCTGTAGATGCCAAACCTACAGGAAAGACGAGCATTATGTGTAGAATGGACAAATCTGACAGAATACTAACACTGACCAACTTGATAGTTATTGTTGATAAGGATACACCACTGATTTTTTCTGGAATGTTTAATTTTGTTGAGAATCCAACCATAAATTCACTGTTTCCAAAAAATGCCACAGTATTTAGAAGTGGAGGAATTAGGATTACAATTAAAGGTAAAGATTTTCTGGATGTTGGAGAAGTCCATGTCGATAATGTGGTAAATACCATTGTTGTATGTGAAACGCCACCATATGTGTCGTCTGATTTTGAAAGACGTAAGCGATCAATTGGACAGAATATCAACATACATTACGACGATTATCAAAATCTGTCGACTATTTATTACATCGATAATCCATTGTTTGAGCAACTGCCACAGATTGAGTATGACAAAGAATCAACAATACTTATCAAGGGAAGAAACTTACTAGGCGGTGCTAGAAAGGAAGATTATTTTGTACAAATAGGTCTGGATGGGACCTGTCTTGTGGCAAAAATTACCAATGAAAATATAACATGCTTACCACCCAAAGAAGTACCTCGTACGAATCATAGCGATGAAAATACTGTATTCATAATGGTAAAAGTTGGTCGTATTCGTGAAATCATTGGCAATTTAAAGTACGTATCAGAGATCCCCGTTCTGACAATTGTGATAGCTGTCATGTCTACAGCCTTCGTTGCTGCTGTTGTAATTACTGTATCTATAGTGCTTGTTGTTAGACAGAAGATGGTTAAGGCAGAGAAAAACTTCGAGATGGAAGTGATAAGTCGAGAAGAAAAGTCAGAGACGCCAGTAGAGAAGTTTGCAGACGTTCAGATGACTATGCGTGACATTAAAACAGACTTGGTGACGTCCAGAGTTCCCTACTTTGACTACCAGTCATATGCCTTCCATCAGTTGTTTCCAAACAAGGAGATGGAAACACACCCACTTCTACACGAGCCTGTGATAACTGATGACAAGAGAAGTAACGTACAGAAAGCCATGACGATGTTTGATAAATTGATGACCAACAAATTGTTCCTTAAATCATTGGTTCAGACATTAGAACACCAAAACAGACTTACAATGAAGGACAAGGCAACCTTTGCATCTATCCTCTCAGTAGCTGTTCTCGGAAACATGAGACTTTTCTACGAACTAGTCAGTTGTTTGTTGCGTGACATGATACAATCAGCTCCTAAGAAACAGCACAAAGTTCTGTTTAGAAGATTTGAATCTATTACCCAGCGATTGATGGTGAACTGGTTAGAAATATCCCTGTATGATCACCTTAAGGATGGAAGTGGAATGCAATTATTTATGTTATATAAGGCTACACAGACAGTGATAGAGAAAGCCCCTATAGATGCCGTCACTGGAAACTCCAGGAATACATTAGCTGAGGAGAGACTGTTAAAAAATGGAGTGGAATATGAAACCATGACCTTGAACATAGATCTAAATGGAAACAGTGATGAGAAGATTCCTGTCTTAGTGTTAGACTGTGATACCATTACACAGACCTTGAACATAGATCTAAATGGAAACAGTGATGAGAAGATTCCTGTCTTAGTGTTAGACTGTGATACTATTACACAGGTCAAACAAAAATGTATTACAGCAATATACAAAAACAAACCAGCTTCTGAAGTACCTACACCACATGAAATAGAGCTCGAATGGCATCATGGTAAGAGTGGAAGACTAACATTACAAGATATTGATAACATCAGTGACCGTAGTAACGGAATGTTACGTCTGAATATCTTAAAGCATTACATGGTGAAAGATGGTAATGTCATGGCTCTGATGTACAAGGAAGATGATGATGTTCCACATGAAACACAAAATATACAGAATACCCTACTGTTGAACCCAGACCATATTAAACTGCAAATACCAGAGGAACAAAATATGAACATATGGCATCTTTCAAACTTAACAGATGAAGAAAAGTCAAATAAAGAAAATGAAATTGGTGAATTGTTTCTCAACAGACTTTTTCAGACCAAGCTGATTTTGAGAGACTACATCGATGCTGCATTTGAAAGAATGTTGGATGCCTTGTCTTTACCGGTTCCTGTTAGATATTTTCTGTGTATGTTAGATAAGCAAGGTAAAGACATTGGAATTGATAATGATGTACTACAAGCCTGGAAAAGTGAATGCTATGGCACAAGAGTTTGGGCGTCATTGATTTCAAAGCCACAGATTTTATTTAATGTAGATGTACCTAGTCATGTAGAGCCGTGCATGGATATTTTAAGACAGGTTTTCATTGACAGTTTCACCATAGGAACACAAAATGTCAGCAAGGAATCGTCGACACAAAAGCTATTATTTTACAAAGATGTCGCAGAGTACAGAAAGAGTGTTAAAACTTTCTTTTTGAAGGTAGAAATGGTTAGTGACCAAGAATTTTGGGGAGCCATGGATGACATGTCTACTGTACAAACAAGGAAGATGAGGTTCAACAGACAAGCCACTTTACACCAGTTAATCAGTTTCATTTCTAGATACGAAGAGGAGATCATTGAAGATTTTGCAGAAGACGACGAAACAAAAAACTTGGAATTTGGAAAACAATTAGAAGAAATTATTAACCTGATGGAATCTTAA

Transcript

Bpl_scaf_64138-7.22

ACGCTTATGTATGACCCTTCATAAACATATAACATATATATTCTATTTTGTTTGTGTTAACAGTTTACGAATGTCAGAATCTAGATAATGTTGATGGAAACTGTGGATATTGTAAATACTGGAAAGGTCAAGGTTATGACTGTGATTGGTGTAACAATGGTTGTACAGTGTCTGGTAGTTGTAGTAGTGAATGGTGTAATGTCGAAGTTTTAATGGTTTTTCCTGTACCTGGACCAGAAAGTGGTGATGATGTAAAAATAACAATTTATGGGAAAAACATAGGAAATCCAAACGACAATATAACAGTAGAGATTTATGGTGTAGAGTGTACTAATATAGAAGTCTTAAGACCTTCTTCTGTAGATGCCAAACCTACAGGAAAGACGAGCATTATGTGTAGAATGGACAAATCTGACAGAATACTAACACTGACCAACTTGATAGTTATTGTTGATAAGGATACACCACTGATTTTTTCTGGAATGTTTAATTTTGTTGAGAATCCAACCATAAATTCACTGTTTCCAAAAAATGCCACAGTATTTAGAAGTGGAGGAATTAGGATTACAATTAAAGGTAAAGATTTTCTGGATGTTGGAGAAGTCCATGTCGATAATGTGGTAAATACCATTGTTGTATGTGAAACGCCACCATATGTGTCGTCTGATTTTGAAAGACGTAAGCGATCAATTGGACAGAATATCAACATACATTACGACGATTATCAAAATCTGTCGACTATTTATTACATCGATAATCCATTGTTTGAGCAACTGCCACAGATTGAGTATGACAAAGAATCAACAATACTTATCAAGGGAAGAAACTTACTAGGCGGTGCTAGAAAGGAAGATTATTTTGTACAAATAGGTCTGGATGGGACCTGTCTTGTGGCAAAAATTACCAATGAAAATATAACATGCTTACCACCCAAAGAAGTACCTCGTACGAATCATAGCGATGAAAATACTGTATTCATAATGGTAAAAGTTGGTCGTATTCGTGAAATCATTGGCAATTTAAAGTACGTATCAGAGATCCCCGTTCTGACAATTGTGATAGCTGTCATGTCTACAGCCTTCGTTGCTGCTGTTGTAATTACTGTATCTATAGTGCTTGTTGTTAGACAGAAGATGGTTAAGGCAGAGAAAAACTTCGAGATGGAAGTGATAAGTCGAGAAGAAAAGTCAGAGACGCCAGTAGAGAAGTTTGCAGACGTTCAGATGACTATGCGTGACATTAAAACAGACTTGGTGACGTCCAGAGTTCCCTACTTTGACTACCAGTCATATGCCTTCCATCAGTTGTTTCCAAACAAGGAGATGGAAACACACCCACTTCTACACGAGCCTGTGATAACTGATGACAAGAGAAGTAACGTACAGAAAGCCATGACGATGTTTGATAAATTGATGACCAACAAATTGTTCCTTAAATCATTGGTTCAGACATTAGAACACCAAAACAGACTTACAATGAAGGACAAGGCAACCTTTGCATCTATCCTCTCAGTAGCTGTTCTCGGAAACATGAGACTTTTCTACGAACTAGTCAGTTGTTTGTTGCGTGACATGATACAATCAGCTCCTAAGAAACAGCACAAAGTTCTGTTTAGAAGATTTGAATCTATTACCCAGCGATTGATGGTGAACTGGTTAGAAATATCCCTGTATGATCACCTTAAGGATGGAAGTGGAATGCAATTATTTATGTTATATAAGGCTACACAGACAGTGATAGAGAAAGCCCCTATAGATGCCGTCACTGGAAACTCCAGGAATACATTAGCTGAGGAGAGACTGTTAAAAAATGGAGTGGAATATGAAACCATGACCTTGAACATAGATCTAAATGGAAACAGTGATGAGAAGATTCCTGTCTTAGTGTTAGACTGTGATACCATTACACAGACCTTGAACATAGATCTAAATGGAAACAGTGATGAGAAGATTCCTGTCTTAGTGTTAGACTGTGATACTATTACACAGGTCAAACAAAAATGTATTACAGCAATATACAAAAACAAACCAGCTTCTGAAGTACCTACACCACATGAAATAGAGCTCGAATGGCATCATGGTAAGAGTGGAAGACTAACATTACAAGATATTGATAACATCAGTGACCGTAGTAACGGAATGTTACGTCTGAATATCTTAAAGCATTACATGGTGAAAGATGGTAATGTCATGGCTCTGATGTACAAGGAAGATGATGATGTTCCACATGAAACACAAAATATACAGAATACCCTACTGTTGAACCCAGACCATATTAAACTGCAAATACCAGAGGAACAAAATATGAACATATGGCATCTTTCAAACTTAACAGATGAAGAAAAGTCAAATAAAGAAAATGAAATTGGTGAATTGTTTCTCAACAGACTTTTTCAGACCAAGCTGATTTTGAGAGACTACATCGATGCTGCATTTGAAAGAATGTTGGATGCCTTGTCTTTACCGGTTCCTGTTAGATATTTTCTGTGTATGTTAGATAAGCAAGGTAAAGACATTGGAATTGATAATGATGTACTACAAGCCTGGAAAAGTGAATGCTATGGCACAAGAGTTTGGGCGTCATTGATTTCAAAGCCACAGATTTTATTTAATGTAGATGTACCTAGTCATGTAGAGCCGTGCATGGATATTTTAAGACAGGTTTTCATTGACAGTTTCACCATAGGAACACAAAATGTCAGCAAGGAATCGTCGACACAAAAGCTATTATTTTACAAAGATGTCGCAGAGTACAGAAAGAGTGTTAAAACTTTCTTTTTGAAGGTAGAAATGGTTAGTGACCAAGAATTTTGGGGAGCCATGGATGACATGTCTACTGTACAAACAAGGAAGATGAGGTTCAACAGACAAGCCACTTTACACCAGTTAATCAGTTTCATTTCTAGATACGAAGAGGAGATCATTGAAGATTTTGCAGAAGACGACGAAACAAAAAACTTGGAATTTGGAAAACAATTAGAAGAAATTATTAACCTGATGGAATCTTAAAAGTGGGATTTTATAGACGTATGCTGCTCCGAAATGGGAAAAAGATAATCCTTTAATCTTACTTTAACAGTATTGATCAGTTGCTTGGAAATGAACCACAAACAATTTGTATTGACAAAAAAGAAGTTTATACGCAGTGCTTTATATATAGTTTGGAGTTTTAATTTTTATATATTTTGTCATTTTAGGATGCATAATTTATCTTCAAGATAGAAGTTCCGTAATGTTAACCTTTTTTTCTTTCTTACGATAAATCCTATTTGTAGATTGTTTGTTATGATAACTAACATTTTTAATGTCAAATTCTTTACTATCATATGACACTATATAGTATGTTTGTTCTCTCTTGTCATTATACATTGTCACGCA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08337	Plexin_cytopl	Plexin cytoplasmic RasGAP domain	Domain	Interproscan
PF20170	Plexin_RBD	Plexin cytoplasmic RhoGTPase-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008936	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR013548	Domain	Plexin, cytoplasmic RasGAP domain	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR031148	Family	Plexin family	Interproscan
IPR046800	Domain	Plexin, cytoplasmic RhoGTPase-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22625	PLEXIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0002116	Cellular Component	semaphorin receptor complex	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0017154	Molecular Function	semaphorin receptor activity	Interproscan
GO:0030334	Biological Process	regulation of cell migration	Interproscan
GO:0071526	Biological Process	semaphorin-plexin signaling pathway	Interproscan
GO:1902287	Biological Process	semaphorin-plexin signaling pathway involved in axon guidance	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06820	PLXNA; plexin A	-	Axon guidance	ko04360	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_64138-7.22 global RNA-seq network