| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_64136-2.19 | E3 UBIQUITIN-PROTEIN LIGASE MYCBP2 | Bpl_scaf_64136 | 74538 | 191486 | + |
| CDS | |||||
| Bpl_scaf_64136-2.19 | |||||
| Transcript |
| Bpl_scaf_64136-2.19 |
| Protein |
| Bpl_scaf_64136-2.19 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00415 | RCC1 | Regulator of chromosome condensation (RCC1) repeat | Repeat | Interproscan |
| PF08005 | PHR | PHR domain | Domain | Interproscan |
| PF13540 | RCC1_2 | Regulator of chromosome condensation (RCC1) repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000408 | Repeat | Regulator of chromosome condensation, RCC1 | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR004939 | Domain | APC10/DOC domain | Interproscan |
| IPR008979 | Homologous_superfamily | Galactose-binding-like domain superfamily | Interproscan |
| IPR009091 | Homologous_superfamily | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | Interproscan |
| IPR012983 | Domain | PHR | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR014756 | Homologous_superfamily | Immunoglobulin E-set | Interproscan |
| IPR017868 | Repeat | Filamin/ABP280 repeat-like | Interproscan |
| IPR038648 | Homologous_superfamily | PHR domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45943 | E3 UBIQUITIN-PROTEIN LIGASE MYCBP2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0007411 | Biological Process | axon guidance | Interproscan |
| GO:0008582 | Biological Process | regulation of synaptic assembly at neuromuscular junction | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10693 | MYCBP2, PAM; RCR-type E3 ubiquitin transferase | EC:2.3.2.33 | Axon regeneration | ko04361 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_64136-2.19 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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