Gene detail

Detailed information of Bpl_scaf_64124-0.3 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_64124-0.3	ACETYL-COA C-ACETYLTRANSFERASE	Bpl_scaf_64124	25348	60191	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_64124-0.3

ATGATGTTTCATTTTGTTTTTGCAGCTACGAAAGCCTTGCAAGATGCAGGAATAATGTTTGATGAAATTGAACAGGCCTGTGTCGGTTATGTATATGGTGATTCTACATGTGGACAGAGAGCATTGTATGAGCTTGGTTTGACTGGAATACCAGTATATAATGTAAACAACAACTGTTCTACAGGATCAACTGCTCTTCTAATGGCAAAACAGTTTATTGAAGGAGGTTTGTCAGATTGTGTCTTGGCATTAGGATTTGAAAAGATGAGCAGGGGTTCATTAAAAAATATATTTCATGATCGTACAAACCCAATGGATAAGCATGTTATGGTTGTTGCTAATACATTTGGACTAGAGAAGGCTCCAATTGCTGCTCAAATGTTTGGAAATGCAGGAAGAGAACATATGCAAAAATATGGTACAAAACCTATACATTTTGCTAAAATTGCTCACAAGAACCATAAGCATTCAACAAACAACCCATACTCACAATTTCAGGATGAATATACGTTGGAACAGATCATGGATTCACCTAAGATTCATGAGCCACTTACAAAACTTCAGTGTTGCCCAACAAGTGATGGTTCTGGAGCAGCTATAATTGCAAGTGAAGATTTTGTAAGGAGGCATGGCCTTGAGAACCAAGCAGTAGAAATATTAGCCATGGAAATGTCTACAGACCTCCCAGGTGTATTTGATGATAATAGTTGTATTAAAGCAGTTGGATATGATATGACAGCAAGAGCAGCAGATAAGGTTTTCAAAAATGCAGGCTTAAGCAGAGATGATGTGAATGTTGTGGAACTACATGATTGTTTCTCAACTAATGAACTTATCACATATGAAGCTCTTGGGTTATGTCCTCCAGGTAAAGCTCCAGAAATGGTTGACACTGGGAACAACACTTATGGTGGGAAATATGTTATTAATCCTAGTGGTGGACTTATTTCTAAAGGCCATCCTCTTGGTGCTACAGGTCTTGCTCAATGTGCTGAACTTTGCTGGCAATTAAGAGGCATGGCTGGCAAAAGACAAGTAACAGATGCTAAAATTGGTTTACAACACAATATTGGACTTGGAGGTGCTGTTGTAGTGGCATTGTATAAAAAAGGATTCCCACAAAATAGAAGTCATATTCAAGCTGTTTCTACTAGTGCTTCAACAGAAGACAAATTTAAATCAGCAGTTATTTTCAAGGAAATCAAAAGCAACCTTGACAAGGATGGAGCAAATTGGGTTAAAAAAATGAAAGGTATTTTCTGCTTTAAAGTGAAATTAAATGATGGTACAGAAGGTGTATGGGTGGTAGATGCCAAAAATGGAAGTGGATCGGTTAAATTTGGTGCTGAACCTAAAGGTGATGTGACTATAATAATGAAAGATGAAGATATGCTCAATTTGATGTTGGGAAAACTTAATCCACAACAGGCATTCTTCCAAGGAAAATTGAAAATTCAAGGAAACATGGGTCTTGCAATGAAGCTGAAAGAATTCCAATCGTCGGCTGGAAAATCCAAACTTTAGATAAGGACTTGCACATGATTGTGATTTCAGGATTAATATTAGTACATTTTTCTACAGATCAGACAAAACATTTTTGTCACAAAGGAAATTTATGGAGTTAATTTGAAGATCATCAGAAATGTGTGGAACAAATATAAAGAAATGTAATTTACCATCAATAGAAATACTTTTATATGTAGTGTGCATATAAACAAAGATATGTGATAATGATAATTTACTGGGCGCAATTTCCAATTTGGAAAGTCGCCGTCAAAAACCATAAAAAAGTACTGGTATTTATCAACTATAAAAAATTAAACCATTATCGATAATAAAGCAGAAAATATATGATGAACATATATTTGTAAACAGAGATATTTGATGATAATTCATTGATCAACTATAAAAAATTAAAAACATTATATATTAAACAGGATCTTTAGCAGTAAAACATATTTAAAAACTTGCTAGAACATAATTGTGAGATGTCTAATTAAGAAATAAATCATGGAAGCCAGAATGTGTTTTGAGCTTTAACATGGGTTGGCGAATATTAGTATTTTATCTCGAGCCAGAGACGAGGGATAAAATTTACTAATATCCGCCAACTCATGTTAAAACTCATAACACATTCCGGCTTCCATGAATTATTTTGATTTGATACAATGTATGTCTAACAGTACAAATATGGCAGTATATTTGATTGGAAGACGGTAATTTATATCTACGTTTGCGGACAATGTCGCACACAATTTATGCTGCCCAATTCAAGCAGACGATAATTCATCAACATGTACTTTTATGACGGGATAGTCAGTCACATATACGACGCATGTGCTAATGAGATTATACCCAATCGATAAATCGCTCGTTTGTTTACAAAGCAAAAGAAGGAAGTCATGTTAGAATATTCTTTAATCAATGCAAATAATGAATTATCTCAGGTCTTATGTCCTACAACTGTCTTTTTATACACTACTTGTTTAATTGTAATTTCATGTGTTAATGAATGTTTTAGATCAATTTTTAAAGATTTTTATTTGTCATTTTTTACGAGATGCCTTAAATGAATGAAATTGTTATGAATATTATGATTTGTCATATAGTGAAAGAATGACAATGGACAGAATCATTGAATTATATTATATGATCATATTTATGTGATTTTAATAAAAAATTATG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00108	Thiolase_N	Thiolase, N-terminal domain	Domain	Interproscan
PF02036	SCP2	SCP-2 sterol transfer family	Domain	Interproscan
PF02803	Thiolase_C	Thiolase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003033	Domain	SCP2 sterol-binding domain	Interproscan
IPR016039	Homologous_superfamily	Thiolase-like	Interproscan
IPR020613	Conserved_site	Thiolase, conserved site	Interproscan
IPR020615	Active_site	Thiolase, acyl-enzyme intermediate active site	Interproscan
IPR020616	Domain	Thiolase, N-terminal	Interproscan
IPR020617	Domain	Thiolase, C-terminal	Interproscan
IPR036527	Homologous_superfamily	SCP2 sterol-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42870	ACETYL-COA C-ACETYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016746	Molecular Function	acyltransferase activity	Interproscan
GO:0016747	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08764	SCP2, SCPX; sterol carrier protein 2	EC:2.3.1.176	Primary bile acid biosynthesis	ko00120	PMID: 28812709
			Peroxisome	ko04146	PMID: 28812709
			PPAR signaling pathway	ko03320	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_64124-0.3 global RNA-seq network