Detailed information of Bpl_scaf_63866-9.14 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_63866-9.14E3 UBIQUITIN-PROTEIN LIGASE UBR4Bpl_scaf_63866766228901606-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|UBR-box

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02207zf-UBRPutative zinc finger in N-recognin (UBR box)FamilyInterproscan
PF13764E3_UbLigase_R4E3 ubiquitin-protein ligase UBR4FamilyInterproscan
PF19423E3_UBR4_NE3 ubiquitin-protein ligase UBR4 N-terminalDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000210DomainBTB/POZ domainInterproscan
IPR003126DomainZinc finger, UBR-typeInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR025704DomainE3 ubiquitin ligase UBR4, C-terminalInterproscan
IPR045189FamilyE3 ubiquitin ligase UBR4-likeInterproscan
IPR045841DomainE3 ubiquitin-protein ligase UBR4, N-terminalInterproscan
IPR047509DomainE3 ubiquitin-protein ligase UBR4-like, UBR-boxInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR21725E3 UBIQUITIN-PROTEIN LIGASE UBR4Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10691UBR4, ZUBR1; E3 ubiquitin-protein ligase UBR4EC:2.3.2.27
Viral carcinogenesis ko05203PMID: 28812709
Human papillomavirus infection ko05165PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_63866-9.14 global RNA-seq network
TOP