| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_63703-3.8 | ELONGATOR COMPLEX PROTEIN 2 | Bpl_scaf_63703 | 231993 | 298678 | - |
| CDS | |||||
| Bpl_scaf_63703-3.8 | |||||
| Transcript |
| Bpl_scaf_63703-3.8 |
| Protein |
| Bpl_scaf_63703-3.8 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00248 | Aldo_ket_red | Aldo/keto reductase family | Domain | Interproscan |
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR020471 | Family | Aldo-keto reductase | Interproscan |
| IPR023210 | Domain | NADP-dependent oxidoreductase domain | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR036812 | Homologous_superfamily | NADP-dependent oxidoreductase domain superfamily | Interproscan |
| IPR037289 | Family | Elongator complex protein 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR44111 | ELONGATOR COMPLEX PROTEIN 2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0002098 | Biological Process | tRNA wobble uridine modification | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0016491 | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0033588 | Cellular Component | elongator holoenzyme complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11374 | ELP2; elongator complex protein 2 | - | Transfer RNA biogenesis | ko03016 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_63703-3.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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