| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_63596-1.4 | ENHANCER OF MRNA-DECAPPING PROTEIN 4 | Bpl_scaf_63596 | 64941 | 113523 | + |
| CDS | |||||
| Bpl_scaf_63596-1.4 | |||||
| Transcript |
| Bpl_scaf_63596-1.4 |
| Protein |
| Bpl_scaf_63596-1.4 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16529 | Ge1_WD40 | WD40 region of Ge1, enhancer of mRNA-decapping protein | Repeat | Interproscan |
| PF21289 | EDC4_C | Enhancer of mRNA-decapping protein 4, C-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR032401 | Domain | Enhancer of mRNA-decapping protein 4, WD40 repeat region | Interproscan |
| IPR044938 | Homologous_superfamily | Enhancer of mRNA-decapping protein 4, conserved C-terminal domain superfamily | Interproscan |
| IPR045152 | Family | Enhancer of mRNA-decapping protein 4-like | Interproscan |
| IPR049404 | Domain | Enhancer of mRNA-decapping protein 4, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15598 | ENHANCER OF MRNA-DECAPPING PROTEIN 4 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000932 | Cellular Component | P-body | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0031087 | Biological Process | deadenylation-independent decapping of nuclear-transcribed mRNA | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12616 | EDC4; enhancer of mRNA-decapping protein 4 | - | RNA degradation | ko03018 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_63596-1.4 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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