Gene detail

Detailed information of Bpl_scaf_63360-20.3 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_63360-20.3	DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 1, ISOFORM A-RELATED	Bpl_scaf_63360	1981738	2017230	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_63360-20.3

TTCAATTTAACTTACATTTATATTTCACAGGTTGTGCCAAACCTCTCAAGTACTATCCTCTATCCAGACAAGACAGATACAGAACTATGTAGCCGTAAATGAACCAATACTCAAATATGAAGAGGGTAGTGATGAAAAGAAGGCTTTAGTCCAGACACTAGAGAAATACAAAGGAAAGACAGAAGATATACCTATTGTTATAGGGGATGAGGAAATCAGAACGAAAGAAGTTAAATTCCAAGTTGAGCCTTTTGATCACCATGAAAAGATTGCAAAGTATCACTATGCTACACCTGATTTAGTACAGAAAGCTATAGATAACAGTTTAAAAGCCAGGAAAGCTTGGGATAGAACACCACTAGAAAAAAGATGTGATGTTTTCTTAAAAGCTGCTGATCTAATGGCTAATAAATACAGAATGGATCTAATGGCTTCTACTATGATGGGACAGGCAAAGAATATTGTGCAGGCAGAGATTGATGCCGTTTGTGAATTGATAGATTTCCTTAGATTTAACGTACAGTATGCAGGGCAACTTATACAATCACAACCAATTAGTCCTACTAGCAGTGTGGAGAAAAATTCTCACCAATACAGAGGTATGGAGGGTTTCTGGGCAACGATTAGTCCTTTCAACTTCACAGCCATTGGAGGACATTTATGTCAAGCACCTACCATCATGGGAAACGTTGCAGTATGGAAACCTTCAGACACAGCCATGCTCTCTAACTATTTAGTGTACAAAATATACCGTGAGGCTGGACTCCCAGCAGGCATTATTAACTTTGTACCAGCTGATGGACCTGTGTTTGGAGATACAGTCACAGGTTCCCCCCATCTTGCTGGAATTAATTTTACTGGTAGTGTTAAGACATTCCAACATTTATGGAAACAAGTAGCTAACAACATAGAAAACTACCGAACATATCCTAGACTTATTGGAGAATGTGGAGGAAAGAATTTCCACTTTGTACACAAGTCAGGTGATCTTGAAAGTGTTGTAAATGGAACCATTAGATCAGCATTTGAGTATGGAGGACAGAAATGTTCTGCCTGTTCCAGAATGTATATTCCACAATCCATGTGGTCGGAGGTCAAAGACAAAATGCTAAATATACACAAGAAAATAAAAGTGGGATCACCATTTGATAAAGATACATTTGTGTCTGCAGTAATAGATGATAAGGCTTTTGATAGAATTAAAGGATACTTGAGTCATGCTAAATCTTCACCTAATTTAACTGTGATAGCTGGTGGTAACTGTGACAACAGCAAAGGATATTTTGTAGAACCTACAATTATTGAGACATCAGATCCTGATGATAAAATAATGCATGAGGAAATCTTTGGTCCTGTAGTAACTGTATACCCTTACCCAGATGATCAGTATAAAGAAATGGCAGAAAAAGTTACACAGACATCACCCTATGCATTAACTGGAGCAATATTTGCTTTAGACGAGAAAGTTAAAGAAGAATTAACAGACACATTCCGAGACAGCGCTGGAAACTTTTACATCAACGATAAAAGTACAGGATCAGTAGTGGGTCAACAACCATTTGGTGGTACCAGATTGTCAGGTACCAATGATAAGGCTGGTGGATCTCAGTATCTTCTTAGATTTGCTTCAATACAATCAGTCAAAGAAACATACAAACCATTAACTGCCTGGCAATACCCATCTATGTCTTAGACATAGGTGTGTGTTGAAGAATACAAACGAGGCATTGTAATAATAACCACATTGTCAAAAGGTTGATTTTTTGTAACAGCTTGAACGTGTCTGCTTTTTTACTTGCGTTGTCCTAATTAAACCTTGCAACAGATATTCTGCAAAATATTAAAAGTACGGTATAATGTGTTCAAGTGAAGAAAAAAATTTGTTGGATTGGTCGTATACATCTAAAAGTATATTCACTATGCATAATAATATTTATAGAAATCCAAATATTCAAGCCTCGCGGTCATAGTATTTTTGAGTACCACGTTTGTACTCGTACTCTAAAATTATCCAATCAGAACACAGCGTACACCATTACAGCATTTTGATTGGATGATTTTGGAAAGTTTGATGACCGTAAGATCTGAGCTTGTTATTTATGTTTTATCATTTACATTGTAATACTCTAATGTCTGTCTGTCTTTACATTTGAAAAAAAAGAAGACGCAAACAGTTTAGATCTGTTAAAAAATAATGGAGATTTACCTCTTTTTCTTTGAATGGTTCTGTTATATTTTCAATAAGATGAAGTATTTTTTACTTTTGACTCATTACTTTTGTTATTGAAATAATTACTTTTAAAAGTGAATACAATCTTTTGTAGTGTTATTGACATGTAAAAGCTTTGAGAAGTACATTTTATATGAAATGTTTTAGCACTTCATATAAAAATTGTGTTTCTGATAACATGGTTCCAACCTTATTAAACTACAAAAATTGGATTCAGTTTGTTTTTAGTATTCTATATTTTCAAGATATTATTGTGTGTATTTATTAATTTTCACGATGTTCAAAAACAGTTCCTGAAAGTGGCATGGTTGAATGGTCATGTGTTTCATTGACTGATGAAGTTTCCAATCAGAAGTCACATGTGACACCTTCTGACCAATCATATGGGACTTTCTATATTATATTAATGCAAAATGTAATTATTTGTTATTGAAGAATTACTTCTTCTTATTTAAGGGATAATTTTGTTATTGAAGGGCTATTTTTGTTATTGCAGGGTACATTGTTTAAGAAAAACACAAGATTGTCAATGAATAATCTAATACCTTGTATTTTATGTGTAAGTAAATTATCATACATTGTACCAATGTTAATTATTTTAATTTAATTACTTGTTTTGTTGTTCTTCCATTTTTATGAAGACATTTAATCAGGAATTAATGTTGTATTACTTTTATTCAGACATTTTTACACCAAGGCTTTCAAATGTACTTGTTTACCCCGAAACTTGTCTAGTAGTTATTTTGCAAGTTCAAGTTAGGCCCAAAAAAAAAAAATTTATGTGTTTACGGTCACCCGACCGACCCTATTTTTCAGCCACTGACCCTAACCTTTTTTATCTGCAATTATTCCACCCTAATATTTGCAAGCGACCCTATCAATTTTTACACAGAATTCGAATAACCATTTTTGTTGTTTAATCAGTAGCAATGTTTTATTTATTCAACCGCTAGCTTTTTGTTGAAATTGAGAGCAAAGAAGGTAGAAAAACTGCGTAACTCGTCACAAAACAGCCTTAGCAAATTTAAATGGTGGCTTACCGGAAATTTCGAAAATAAAATACCGGGATCGGATTCCTGAATCTGGAACAAGTATTTCCAGTTTTGCCAATAGTTAAAAAAAAAAAAAAAATTAATGCCTACTTACCGACCCTAGATTTTTTTGACATGTGACCGTAAACACACATATTTTTTTTTTGGCCTTACCTCCCTTTCTCTTGTAAAATTGAAAAGAGGAGTTTACCTGTTAACCAATTGCAATTTTTATCTCGATCAAAATATGCTTTACTTGGCAATAAAATTGTTCAAAACATTTCTCTTAAATGCTTATATTATATAAGTAGATGTTATAATTAATTCACAAACAACTTTACACAGTTAATGATA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00171	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005931	Family	Delta-1-pyrroline-5-carboxylate dehydrogenase	Interproscan
IPR015590	Domain	Aldehyde dehydrogenase domain	Interproscan
IPR016160	Conserved_site	Aldehyde dehydrogenase, cysteine active site	Interproscan
IPR016161	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR016162	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR016163	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan
IPR029510	Conserved_site	Aldehyde dehydrogenase, glutamic acid active site	Interproscan
IPR050485	Family	Proline metabolism enzyme	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42862	DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 1, ISOFORM A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003842	Molecular Function	1-pyrroline-5-carboxylate dehydrogenase activity	Interproscan
GO:0005759	Cellular Component	mitochondrial matrix	Interproscan
GO:0010133	Biological Process	proline catabolic process to glutamate	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016620	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00294	E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase	EC:1.2.1.88	Alanine, aspartate and glutamate metabolism	ko00250	PMID: 28812709
K00294	E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase	EC:1.2.1.88	Arginine and proline metabolism	ko00330	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_63360-20.3 global RNA-seq network