| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_62525-0.14 | PHD FINGER-LIKE DOMAIN-CONTAINING PROTEIN 5A | Bpl_scaf_62525 | 56695 | 67392 | + |
| CDS | |||||
| Bpl_scaf_62525-0.14 | |||||
| Transcript |
| Bpl_scaf_62525-0.14 |
| Protein |
| Bpl_scaf_62525-0.14 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03660 | PHF5 | PHF5-like protein | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005345 | Family | PHF5-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13120 | PHD FINGER-LIKE DOMAIN-CONTAINING PROTEIN 5A | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0005686 | Cellular Component | U2 snRNP | Interproscan |
| GO:0005689 | Cellular Component | U12-type spliceosomal complex | Interproscan |
| GO:0071011 | Cellular Component | precatalytic spliceosome | Interproscan |
| GO:0071013 | Cellular Component | catalytic step 2 spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12834 | PHF5A; PHD finger-like domain-containing protein 5A | - | Spliceosome | ko03040 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_62525-0.14 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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