| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_62498-0.9 | REGULATOR OF CHROMOSOME CONDENSATION | Bpl_scaf_62498 | 4201 | 53343 | + |
| CDS | |||||
| Bpl_scaf_62498-0.9 | |||||
| Transcript |
| Bpl_scaf_62498-0.9 |
| Protein |
| Bpl_scaf_62498-0.9 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity|HECT |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00415 | RCC1 | Regulator of chromosome condensation (RCC1) repeat | Repeat | Interproscan |
| PF00569 | ZZ | Zinc finger, ZZ type | Domain | Interproscan |
| PF00632 | HECT | HECT-domain (ubiquitin-transferase) | Domain | Interproscan |
| PF03256 | ANAPC10 | Anaphase-promoting complex, subunit 10 (APC10) | Family | Interproscan |
| PF11515 | Cul7 | Mouse development and cellular proliferation protein Cullin-7 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000408 | Repeat | Regulator of chromosome condensation, RCC1 | Interproscan |
| IPR000433 | Domain | Zinc finger, ZZ-type | Interproscan |
| IPR000569 | Domain | HECT domain | Interproscan |
| IPR004939 | Domain | APC10/DOC domain | Interproscan |
| IPR008979 | Homologous_superfamily | Galactose-binding-like domain superfamily | Interproscan |
| IPR009060 | Homologous_superfamily | UBA-like superfamily | Interproscan |
| IPR009091 | Homologous_superfamily | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | Interproscan |
| IPR014722 | Homologous_superfamily | Large ribosomal subunit protein uL2, domain 2 | Interproscan |
| IPR015940 | Domain | Ubiquitin-associated domain | Interproscan |
| IPR021097 | Domain | CPH domain | Interproscan |
| IPR035983 | Homologous_superfamily | HECT, E3 ligase catalytic domain | Interproscan |
| IPR037976 | Domain | HERC2, APC10 domain | Interproscan |
| IPR043145 | Homologous_superfamily | Zinc finger, ZZ-type superfamily | Interproscan |
| IPR051210 | Family | Ubiquitin ligases and GEF domain-containing protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22870 | REGULATOR OF CHROMOSOME CONDENSATION | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10595 | HERC2; E3 ubiquitin-protein ligase HERC2 | EC:2.3.2.26 | Ubiquitin mediated proteolysis | ko04120 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_62498-0.9 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
