Gene detail

Detailed information of Bpl_scaf_62448-0.26 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_62448-0.26	GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE	Bpl_scaf_62448	156903	172712	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_62448-0.26

CTTGGATCTTAAAACGTGAGAACATAACAGCTTTAACAGTTTTGCAATAACGATCATGTGATGCTCAAAATTAACACCGTTAATAAGTTCTGATAAAACATGGCGGTGATAATTGTTAGAAAAAAGTAGACAGAGTGTGTCCAAGAAGTCAGTACAGATGATGTACCTAGATAGTTGTTAAATCCTGTGTTATCTGTAACAGTGTTGGTGCTATGTTGGAATGGTACAAATCCGCACTAGAAAGTTATTTGTTTTATATATATCAGTAACAACAATAGCATTTATATGGCTGTATAACAAGTCAGGTGAGAGTAAATGTAAAGAAGAAGACTTAGAAGAATTGATAGATTGGTACAAATGGAAAAATGCACAGCTTCAGGGTGAACTTGATGATACTAAAAGGGATTTAAGAATATCAAAGAAGATGACAACAAAGACTCGAGCAGAATTGTCTGATGAATCGAGAAACAAACGTCTTACAAATGAACTGAATGATGTCAAGGATTATTTAAAAGAATGCCAAAAGAAATTATTATTTAAGGAAAGAGCAGCATTGTCGGATTATCCTGTCATATACTTGGTCACACCTACTTATGCTTATTCTGAACAAAAGGCCAACTTGATTGGTTTATCACATACATTATTACATTTGAAAAATGTTCACTGGATTTTGATAGAAGATTCTTTTAATAAAACAAGTTTGGTAACAAATTTTCTAGTGAATTCTGGTATTACTTACACACATTTAAACGTGGAAACACCACCTGATATCAAGCTGAAACAAAGTGATCCAACATGGCTGAAACCGAAAGGTGTACTGCAAAGGAATGCTGCCTTAAGATGGCTCAGGCAGAACTTAAATCCACAAAATAATCGTGGAGTGGTGTATTTTGCTGATGATGATAACACTTACAGTCTAGACATCTTTAATGAGATGAGATTCACTAAAAAAGTGACAGTTTGGCCTGTAGGTCTGGTAGGGGGACTTAGATATGAGAAACCAGTTGTAACAGATGGAAAGGTAACCAGTTGGTTGACTTATTGGAAGCCTGAACGACCATTTCCAATGGATATGGCAGGATTTGCTATAAATTTAAAGCTGTTCTTTGATTATCCAAATGCCTGGTTTAGTAATGCTGTGCCTAGAGGTTATCTTGAGTCAACAATTCTTGAACAACTGCACATTAAGATGACAGACTTGGAACCCAAAGCTGATAATTGTTCTAAGGTTCTGGTTTGGCATACAAGAACAGAAAAAACTAAACTCAAGAATGAACAGAAGATGATCAGAAAATTTGGACATGGAACTGACAATGATATTGAAGTCTGAACTTGGGACAAAGCTATCTGGAATTCTTATACCTCAGAGTTCAGTCATAATAAAAAAGAACAAAACCAAATGATTACCAGTAGAATGGTTAGAGAGCTTACTTGTAAATTCAGGAAGGAAAGAAGTATTCAAAGTTATTATAAATAAATTTTGAACCAATTATGTCTTTGAAGAACAGAATGTGACCCAATATATTGTTGAAAGAGGTGTACTTAGAGGGTGTTGGTGAATATATTACAATTCAACTTAAATTGTATTAAACCACTGAACATTTAATTGTGTTCATTTCATAGATTAAGGAAAGCTAAGTGTCTATGGTTGATTTAATTTGTATGTTTTAAATCTGTTTTTTGAAAATGCTATCACTATAAATGGCTGTAGATTATAGCTGAAAAATTGTTGAAGCTAATTGTAGCATTCATTAAATAAAATATTGTAGGGGGCAAATACTGGAAACTTCTTGTATGTGATTTCATGTCTTTTGAACATATAATACACTATATTTTATTATCTGATGTATTACAATGTAGTAAGAAATTCTTAATGAACATTTACTACTGTTACCTCTCCCGACAAAGGCCATAAAAACATCAGGCCAACTTTTACAGGTTCCATGGAGAATCAGGCACACAATTACATTCCAAAACATGATAGAAGTAATTAACCTATAAAACATCATAGATCTTCATCTGTTTGATCAGAATTAGACATCAAATTACATCAAAGGTAAATGTTCATGGCCACCTAATTCCATCTGCATGCAATCAACAGCATCAACAATTATTACATACATACAATGCAGGATAATTCCCGAGATTTTATGATTAATATTTAGTACCAAAAATAACAAATTGAATCATTCAGTGCTGCAGTGTAATTGTATGATCTCCTCTGAACATTTTAGATATATGTTTTACATACATATACTTTGTCAATTGACAACTGAGAGCATACAATGGGTCGGTGATTATTAACAATTATTTTTTAAATCTCTTTAAAAAACATCAGAGGATCCCCTATATGATTTATGGCCCATTTGTAAAGTAATGGTAAATTTGATATAGCATATATATGGTTCTACATTATGGCATGAGATCTGGAATCCTGCTAGTCCAAAATAATGTTTTGGTAAAATATTTATGCAACTTGGGACACAATTTTTCTTCTTCGTGAACCATTTTATTGAACAAGCTTAAAAATAAATGATTGTAGAGGACAGAAAGTAAAAACCTATCATTATATTGCTTATTTGACTAGGCATACGAACAAATTTTCTAATCAAGATATTACTCAATCAATATTAGATCCATAGGTTGTGTTTATTATTATATATTTCAGTATTCCACTAACATCCAACAGATTCCAGTATCGGGTCATTACAACATTAACATTTAGAAGTTCTCTGTACTCCTACATAAACCCACTGTCCTGTTCAATCCATTGCAGGCTCTTCTGTGATTGGTTGTTGGAAATGTGACCCCTAACTTGACCCCATACAGGAGTTTAGATGTTGGTGTACTGCAGGATAATAAATTGAAAAAACATCCAACAAATACCCAATCTTATTTACTGATATATTGCAACTTTTTATATTTGTTATTGTTTTTTTCTTTGTACAAAATTTGTAATTACCCATGAAATATTAAAATAACTATTTTATGTTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03360	Glyco_transf_43	Glycosyltransferase family 43	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005027	Family	Glycosyl transferase, family 43	Interproscan
IPR029044	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10896	GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000139	Cellular Component	Golgi membrane	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0015018	Molecular Function	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0050650	Biological Process	chondroitin sulfate proteoglycan biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10158	B3GAT3; galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3	EC:2.4.1.135	Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate	ko00532	PMID: 28812709
K10158		EC:2.4.1.135	Glycosaminoglycan biosynthesis - heparan sulfate / heparin	ko00534	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_62448-0.26 global RNA-seq network