Detailed information of Bpl_scaf_62441-15.23 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_62441-15.23ZINC FINGER, RING/FYVE/PHD-TYPEBpl_scaf_6244114974331516339+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05605zf-Di19Drought induced 19 protein (Di19), zinc-bindingDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003903Conserved_siteUbiquitin interacting motifInterproscan
IPR008598DomainDrought induced 19 protein type, zinc-binding domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR051438FamilyRNF E3 ubiquitin-protein ligaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46016ZINC FINGER, RING/FYVE/PHD-TYPEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17044RNF166; E3 ubiquitin-protein ligase RNF166EC:2.3.2.27
Ubiquitin systemko04121PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_62441-15.23 global RNA-seq network
TOP