Gene detail

Detailed information of Bpl_scaf_62418-1.13 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_62418-1.13	CASEIN KINASE II SUBUNIT ALPHA	Bpl_scaf_62418	142512	171511	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_62418-1.13

CTTTACTTTACACGAGGCAAAGAGCCTCGTTCCAACTTCGCGGCAGACCAAGGCAGCCATTTTGTGGATAGAATGACTCGACCTGTCAATGAATATGAACTGATATTACATCCTAAATGAAAATTTGGAATATTTTAAGGGTTTTGATATAAAGATCAAAGATTAAGCTATTCTGAAAATTCAATATATTTGATCAATAACTCCAATTTATGTGAATGTTTGCCGGTTCTCATGGTGTGGTATAAACCATTTTCAGAGTTGTTTCTGGAGATGTAAGGAGCACCCAGAAAATATTTGTTTGGTTTGTACGGAAACTTGTGTGTGATATTATTTTGTTACCGAACTGTCTTCTTTTTGTTATATTTGTGTCGTAAAGTTAAATTATAGAAAATTCATAGAACACTAACACATTTGTGCAGAAATTTTTCTGTTCAAGAAATTGTAAATTCGGTTCAAAGGCGGAGTCTGAACACAAAGATGCCGGCAACAAGTAGAGCAAGAGTTTATGCCGATGTGAATACACAGAGACCAAGAGAATACTGGGATTATGAAGCACATGTCGTTGAATGGGGCCAACAAGACGACTATCAAATTGTAAGGAAACTTGGTCGAGGAAAATACAGTGAAGTTTTTGAGGCTGTGAATATCACCAATAATGAAAAATGTGTCATAAAAATACTGAAGCCTGTTAAAAAGAAGAAAATAAAGAGAGAGATAAAGATATTAGAAAATCTACGTGGTGGAACTAATATAATATCGTTGATGGCAATTGTCAAGGATCCCGTGTCACGGACGCCAGCCTTGATATTTGAACATGTGAATAACACAGACTTTAAGCAATTATACCAGACTTTCACAGATTATGACATTAGGTTTTATTTGTTTGAATTACTTAAGGCATTAGATTATTGTCATAGTATGGGCATAATGCACAGAGATGTTAAACCACACAATGTAATGATAGATCATGAAACAAGAAAGTTACGACTTATAGACTGGGGTCTAGCAGAATTTTATCATTGTGGTATGGAATACAATGTACGAGTAGCTTCTAGATATTTTAAAGGTCCAGAACTTTTACTTGACTATCAGATGTATGATTATTCACTAGATATGTGGAGTCTAGGATGTATGTTTGCTAGTATGATTTTTAGAAAAGAACCATTTTTTCATGGGCATGATAATTATGATCAGCTTGTACGAATAGCCAAAGTATTAGGTACAGATGAATTGTATGCATACATAGAAAAGTATCAAGTAGATTTAGATGCTCGATTTAATGACATTTTAGGAAGACATTCACGAAAACGATGGGAAAGATTTGTACATAGTGAAAACCAACATTTAGTGAGTCCCGAGGCATTGGACTTTTTAGATAAATTATTGCGATATGATCATCTTGACAGACTAACAGCTAGGGCAGCTATGGAACATCCATACTTTTATCCTATAGTGAAAGAACAAGGAAGAATATCGTCTTCAATGTCAGGGCACAATTCACCCACTCCCATACCTAATCAGACAGGACAAATAGGAGGTACGACCATGAACAGTACTGCAGCTGTCAACAGTTCACCCGTCATGACCCCCAGTATGTCGCCCCTCCCTAACAGTACAGCTGCCGCCCAATCTTAGTGCTATATATGTCTGCTTGGGCTTGAGTTCGTGCCTAATGTGATAACAATACTTTGCCGCCGGCTACAGGGAAACAATTTTGCCTGACACTGGAGAAACGGTTCTGAGCATTTATTTATATGATGAACAGCCATATTGTGTCAACTTGTGCAAATTGTAATCACTTGAACAAAATCAAGAGGGCAACAAGCAATACAAGATACTAATATTTCATTTTATTCATCACATGATCTGATATTAGCCCTACTAGAATATTGATATTAGCCCTTTTGACATTTTCTCAAATTTAATTTGGCTTGAGTTATATTTCTGTATTTTCCACCAACTGTAGTTTTAAGTTAGAACTGTCTACAGCATTCATTGTCAGAAAAAAATTGCACTTTCTGAACTGTTTATTAATCTGTATTTGTGATGCTAAAATTGTGAGCAGGGAGCTTGTGAAATCAGTATTTTTGGTGCAATGGGTATTAATACAAGATAGATTATTAACTTTGTTTACCCTAATATCAGTAAAATATCAATATTAAAATCAATAATTTGTCAGTCAATTACCCAAGGCTAAGGTTTGATCATGTTGTACACTAATGATTTTTGACAAGTATATATAGTGTGAAAACTAGTTGTTCATTTAATTAATAAAAGTCTAGCTGTATTTTGTAAGTCAAGGTCACCATAATTTAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR045216	Family	Casein Kinase 2, subunit alpha	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24054	CASEIN KINASE II SUBUNIT ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0005956	Cellular Component	protein kinase CK2 complex	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0018105	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0018107	Biological Process	peptidyl-threonine phosphorylation	Interproscan
GO:0051726	Biological Process	regulation of cell cycle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03097	CSNK2A; casein kinase II subunit alpha	EC:2.7.11.1	Ribosome biogenesis in eukaryotes	ko03008	PMID: 28812709
			Wnt signaling pathway	ko04310	PMID: 28812709
			NF-kappa B signaling pathway	ko04064	PMID: 28812709
			Mitophagy - animal	ko04137	PMID: 28812709
			Mitophagy - yeast	ko04139	PMID: 28812709
			Adherens junction	ko04520	PMID: 28812709
			Circadian rhythm - plant	ko04712	PMID: 28812709
			Measles	ko05162	PMID: 28812709
			Herpes simplex infection	ko05168	PMID: 28812709
			Epstein-Barr virus infection	ko05169	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_62418-1.13 global RNA-seq network