| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_62257-0.7 | U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED | Bpl_scaf_62257 | 11843 | 39099 | + |
| CDS | |||||
| Bpl_scaf_62257-0.7 | |||||
| Transcript |
| Bpl_scaf_62257-0.7 |
| Protein |
| Bpl_scaf_62257-0.7 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01480 | PWI | PWI domain | Family | Interproscan |
| PF06544 | Prp3_C | Small nuclear ribonucleoprotein Prp3, C-terminal domain | Domain | Interproscan |
| PF08572 | PRP3 | pre-mRNA processing factor 3 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002483 | Domain | PWI domain | Interproscan |
| IPR010541 | Domain | Small nuclear ribonucleoprotein Prp3, C-terminal domain | Interproscan |
| IPR013881 | Domain | Pre-mRNA-splicing factor 3 domain | Interproscan |
| IPR027104 | Family | U4/U6 small nuclear ribonucleoprotein Prp3 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14212 | U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0046540 | Cellular Component | U4/U6 x U5 tri-snRNP complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12843 | PRPF3, PRP3; U4/U6 small nuclear ribonucleoprotein PRP3 | - | Spliceosome | ko03040 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_62257-0.7 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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