Detailed information of Bpl_scaf_62231-0.7 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_62231-0.7RHO FAMILY GTPASEBpl_scaf_622314593458065+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00071RasRas familyDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001806FamilySmall GTPaseInterproscan
IPR003578FamilySmall GTPase RhoInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24072RHO FAMILY GTPASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0007264Biological Processsmall GTPase-mediated signal transductionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04392RAC1; Ras-related C3 botulinum toxin substrate 1-Ras signaling pathway ko04014PMID: 28812709
Rap1 signaling pathway ko04015PMID: 28812709
MAPK signaling pathway ko04010PMID: 28812709
MAPK signaling pathway - fly ko04013PMID: 28812709
Wnt signaling pathway ko04310PMID: 28812709
VEGF signaling pathway ko04370PMID: 28812709
Sphingolipid signaling pathway ko04071PMID: 28812709
cAMP signaling pathway ko04024PMID: 28812709
PI3K-Akt signaling pathway ko04151PMID: 28812709
Phagosome ko04145PMID: 28812709
Focal adhesion ko04510PMID: 28812709
Adherens junction ko04520PMID: 28812709
Tight junction ko04530PMID: 28812709
Regulation of actin cytoskeleton ko04810PMID: 28812709
Toll-like receptor signaling pathway ko04620PMID: 28812709
Natural killer cell mediated cytotoxicity ko04650PMID: 28812709
B cell receptor signaling pathway ko04662PMID: 28812709
Fc epsilon RI signaling pathway ko04664PMID: 28812709
Fc gamma R-mediated phagocytosis ko04666PMID: 28812709
Leukocyte transendothelial migration ko04670PMID: 28812709
Chemokine signaling pathway ko04062PMID: 28812709
Pancreatic secretion ko04972PMID: 28812709
Neurotrophin signaling pathway ko04722PMID: 28812709
Axon guidance ko04360PMID: 28812709
Osteoclast differentiation ko04380PMID: 28812709
Pathways in cancer ko05200PMID: 28812709
Choline metabolism in cancer ko05231PMID: 28812709
Proteoglycans in cancer ko05205PMID: 28812709
Viral carcinogenesis ko05203PMID: 28812709
Colorectal cancer ko05210PMID: 28812709
Pancreatic cancer ko05212PMID: 28812709
Renal cell carcinoma ko05211PMID: 28812709
Amyotrophic lateral sclerosis (ALS) ko05014PMID: 28812709
Fluid shear stress and atherosclerosis ko05418PMID: 28812709
Viral myocarditis ko05416PMID: 28812709
Non-alcoholic fatty liver disease (NAFLD) ko04932PMID: 28812709
AGE-RAGE signaling pathway in diabetic complications ko04933PMID: 28812709
Epithelial cell signaling in Helicobacter pylori infection ko05120PMID: 28812709
Salmonella infection ko05132PMID: 28812709
Shigellosis ko05131PMID: 28812709
Bacterial invasion of epithelial cells ko05100PMID: 28812709
Kaposi's sarcoma-associated herpesvirus infection ko05167PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_62231-0.7 global RNA-seq network
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