Detailed information of Bpl_scaf_61969-4.3 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_61969-4.3POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1Bpl_scaf_61969397180415812+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04857CAF1CAF1 family ribonucleaseFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR006941FamilyRibonuclease CAF1Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR051181FamilyCAF1 family poly(A)-specific ribonucleasesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15092POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0015030Cellular ComponentCajal bodyInterproscan
GO:0017069Molecular FunctionsnRNA bindingInterproscan
GO:0034472Biological ProcesssnRNA 3'-end processingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13202TOE1; target of EGR1 protein 1-Spliceosomeko03041PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_61969-4.3 global RNA-seq network
TOP