Gene detail

Detailed information of Bpl_scaf_61932-0.12 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_61932-0.12	ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT	Bpl_scaf_61932	3539	17633	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_61932-0.12

ATGACAAGGTGTGTTCGAAATGAAAAGTACTTGGTACTGAAGGAACATATTGAACAGAAAATTTCTTATGGGAAATACTTGTCACCATTTGCCAAGAATGATTTCATTCATTGGTGCGAATTGGAAATCAGAAGTAAAATTGTAAGCAGATGTAATCAATCCAATTTCTTCAGTGTAATGGCAGACTGCTCGAATCAAGCGCAACTTTCAATCTACATTCGATATTGTTATACCGAAAACGATGTATGCTATGTGACGGAAGATTTCTGTGGTTTTGTAGAGCTTGTTAAAACGAATGCAGAGACAAAATCAACATGCATACTAAATAAACTCCGTGAATGGGGTTTCGAGTTGACACGTTTAAGAGGACAAGGTTATGACGGATGTTCTACGATGTCTGGAGAAGTGTCCGGTGTCGAGACGAGAATTATTCAAGAGCTTCCAAATGCGAAGTATTTCATACACTGTCGGTCACACTGCCTAAATCTTGTCATTGTCAACAGTTGTCAGTCAGTCGCAGTTGTCAGAAATTGTATGGCAATTTTAGGAAAAATCACATGGTTCATCAGTGCGTCGAGTAAGCGTAGAAATATTATGAAATCTGTAATGAAAGATGAAGGTCAAGTCGCCGTTAAATTTGATTTGATGTATGATCAAGAAGAAGGTATATTTAACCAGGAAAAACAACTCCTGCCAACACTAGCAGAAACTCGATGGACATCACGAACTGATACATTAACTTGGCTGTTGAAACACTATAACAAGGTTCTTGATATACTTGATGAAATTCAAAACCAAACCGTCGGCAACTCAGATGCAACATCCTATAAACTGACTTTACTTAATTTTGAAATATTAGTGGTCACAGTCGTAACCCAGTTCCTACTAGGATACTTAAACTCCATAGAACTTGAGTCTGAAAACTGTGATATTGTGGAAGCACCCGTTCAAGCTCGAACACTAGCTACATCTTTTCTCGAGATACGAGAAAATGCCGAGGAAGCATTTGACGGACTTCTCAATAGAGCATGTACAATCGCCAATAAGAACGAAATTACGATCAACAAACCGCGAACATCTGGACGCCAACGCCGTAGAGCAAATGCAGCAGCTGAAACTGTTCGAGTGAAACCAGATAAATCTGGTGTGGTCACAGATGGAGTCAAACATAGCATGAACCCATTTGATGAAATTGCTATTGAAGAAGCAGTCAGACTTAAAGAGAAGAAAATAGCATCAGAAGTAATAGCTGTATCATGTGGTCCACAACAATGTCAGGAGACATTAAGAACAGCTCTTGCCATGGGTGCAGACAAAGCTATACATGTAAAAGTTGAGGCCAAAGATTATGAAACTTTACAGCCTATACATGTTTCCAAAATGATCGCCAAGATTGCCCAAGAAGAAAAAGCTGATATTGTTATTGTTGGAAAACAGGCTATTGACGATGACTGTAACCAGACAGGACAGATGACAGCTGCTTTCCTAGACTGGCCACAGGCTACATTTGCATCAAAAATAGAAAAAAATAACGGTGATTTAACAGTAGTTAGAGAAATCGATGGTGGATTAGAAACGATTAAAGTTAAATTACCTACAGTGTTAACAGCCGATTTAAGATTAAATGAACCCAGATATGCAACATTACCTAATATTATGAAAGCAAAGAAAAAGCCCATGGCCAGTAAGACACCATCAGATTTAGGTGTTGATGTGACGTCTAGACAAGAAATCATCAGTGTAGAAGATCCACCCGTTAGAGAAGCAGGACAGAAAGTAGAAAGTGTAGAGGAATTAGTGTCTAAATTAAAGGAGGCTGGATTAGTATGATAGTGTTATGTTTTTTGTTAGATTGAAGATAAATGGACCAACTAGTGAATTCAAATTACAAGTTGATGGATGAAAACATAAATTATGATTGCTTGTAGAACAAGATCAAGAACACTATATATTTATACATGTGATAACTGTGTATTATCATAATAAATAAAACAGATTCTTTATTA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01012	ETF	Electron transfer flavoprotein domain	Domain	Interproscan
PF14291	DUF4371	Domain of unknown function (DUF4371)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000049	Conserved_site	Electron transfer flavoprotein, beta-subunit, conserved site	Interproscan
IPR012255	Family	Electron transfer flavoprotein, beta subunit	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR014730	Domain	Electron transfer flavoprotein, alpha/beta-subunit, N-terminal	Interproscan
IPR025398	Domain	Domain of unknown function DUF4371	Interproscan
IPR033948	Domain	Electron transfer flavoprotein, beta subunit, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21294	ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0009055	Molecular Function	electron transfer activity	Interproscan
GO:0009063	Biological Process	amino acid catabolic process	Interproscan
GO:0033539	Biological Process	fatty acid beta-oxidation using acyl-CoA dehydrogenase	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03521	fixA, etfB; electron transfer flavoprotein beta subunit	-	Non-coding RNAs	ko03100	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_61932-0.12 global RNA-seq network