| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_61711-5.11 | RNA-BINDING PROTEIN RELATED | Bpl_scaf_61711 | 524607 | 545451 | + |
| CDS | |||||
| Bpl_scaf_61711-5.11 | |||||
| Transcript |
| Bpl_scaf_61711-5.11 |
| Protein |
| Bpl_scaf_61711-5.11 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16544 | STAR_dimer | Homodimerisation region of STAR domain protein | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004087 | Domain | K Homology domain | Interproscan |
| IPR032377 | Domain | STAR protein, homodimerisation region | Interproscan |
| IPR036612 | Homologous_superfamily | K Homology domain, type 1 superfamily | Interproscan |
| IPR045071 | Family | KH domain-containing BBP-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11208 | RNA-BINDING PROTEIN RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0048024 | Biological Process | regulation of mRNA splicing, via spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14945 | QKI; protein quaking | - | Spliceosome | ko03041 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_61711-5.11 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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