| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_61711-3.9 | RE52028P | Bpl_scaf_61711 | 346187 | 358686 | + |
| CDS | |||||
| Bpl_scaf_61711-3.9 | |||||
| Transcript |
| Bpl_scaf_61711-3.9 |
| Protein |
| Bpl_scaf_61711-3.9 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00787 | PX | PX domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001683 | Domain | Phox homology | Interproscan |
| IPR036871 | Homologous_superfamily | PX domain superfamily | Interproscan |
| IPR051074 | Family | Sorting Nexin | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45963 | RE52028P | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0030904 | Cellular Component | retromer complex | Interproscan |
| GO:0031901 | Cellular Component | early endosome membrane | Interproscan |
| GO:0032266 | Molecular Function | phosphatidylinositol-3-phosphate binding | Interproscan |
| GO:0032456 | Biological Process | endocytic recycling | Interproscan |
| GO:0034499 | Biological Process | late endosome to Golgi transport | Interproscan |
| GO:0035091 | Molecular Function | phosphatidylinositol binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K17918 | SNX3_12; sorting nexin-3/12 | - | Endocytosis | ko04144 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_61711-3.9 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
