| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_61340-8.27 | PROTEIN PATCHED | Bpl_scaf_61340 | 712812 | 754908 | + |
| CDS | |||||
| Bpl_scaf_61340-8.27 | |||||
| Transcript |
| Bpl_scaf_61340-8.27 |
| Protein |
| Bpl_scaf_61340-8.27 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02460 | Patched | Patched family | Family | Interproscan |
| PF12349 | Sterol-sensing | Sterol-sensing domain of SREBP cleavage-activation | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000731 | Domain | Sterol-sensing domain | Interproscan |
| IPR003392 | Family | Protein patched/dispatched | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46022 | PROTEIN PATCHED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005119 | Molecular Function | smoothened binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0008158 | Molecular Function | hedgehog receptor activity | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0045879 | Biological Process | negative regulation of smoothened signaling pathway | Interproscan |
| GO:0097108 | Molecular Function | hedgehog family protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06225 | PTCH1; patched 1 | - | Hedgehog signaling pathway | ko04340 | PMID: 28812709 |
| Hedgehog signaling pathway - fly | ko04341 | PMID: 28812709 | |||
| cAMP signaling pathway | ko04024 | PMID: 28812709 | |||
| Axon guidance | ko04360 | PMID: 28812709 | |||
| Pathways in cancer | ko05200 | PMID: 28812709 | |||
| Proteoglycans in cancer | ko05205 | PMID: 28812709 | |||
| Basal cell carcinoma | ko05217 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_61340-8.27 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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