Detailed information of Bpl_scaf_61122-2.0 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_61122-2.0DNA-DIRECTED RNA POLYMERASE II, IIIBpl_scaf_61122208535225330+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03876SHS2_Rpb7-NSHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397DomainInterproscan
PF08292RNA_pol_Rbc25RNA polymerase III subunit Rpc25DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004519FamilyDNA-directed RNA polymerase, subunit E/RPC8Interproscan
IPR005576DomainRNA polymerase Rpb7-like , N-terminalInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR013238DomainRNA polymerase III, subunit Rpc25Interproscan
IPR036898Homologous_superfamilyRNA polymerase Rpb7-like, N-terminal domain superfamilyInterproscan
IPR045113FamilyRNA polymerase subunit Rpb7-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12709DNA-DIRECTED RNA POLYMERASE II, IIIInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0005666Cellular ComponentRNA polymerase III complexInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0006352Biological ProcessDNA-templated transcription initiationInterproscan
GO:0006384Biological Processtranscription initiation at RNA polymerase III promoterInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03022RPC8, POLR3H; DNA-directed RNA polymerase III subunit RPC8-Purine metabolism ko00230PMID: 28812709
Pyrimidine metabolism ko00240PMID: 28812709
RNA polymerase ko03020PMID: 28812709
Cytosolic DNA-sensing pathway ko04623PMID: 28812709
Epstein-Barr virus infection ko05169PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_61122-2.0 global RNA-seq network
TOP