Gene detail

Detailed information of Bpl_scaf_60785-3.15 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_60785-3.15	SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B	Bpl_scaf_60785	249622	315544	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_60785-3.15

ATGCCGGGGAATAAACCGAAAAAGGACAAGACGGTGACTAAATCAGCGGGTGGCACAAAAGCTGGTGCAAAGGAAAATTCAGAAAATACAGACAATGAGGGTAAAAAGAAACCAGCAAAGATATTGCCCCCAGAACATCCACCACCTGCACAAATTAACAAAATACATGCCACAGGACCAAATATTAAGAAAGATAAAAGACAGAATTCATCAAGATTTAATGTTACAAAGAATAGGGAATTGCAAAAATTGCCCCTGTTAAAAGAAAGAGAGGACTTGTTTATTCAGAAAATAAGGCAATGTTGTGTTCTATTTGACTTTGTAATAGACCCTCTAAGTGATTTAAAGTGGAAAGAAGTTAAGAGGGCAGCTCTCAATGAGATGGTGGAATTTGTTTCGCACAACAGGGGCGTTATAACAGAACCAATTTATCCTGAAGCTATACATATGTTTAGTGTTAATTTATTCAGAACATTACCTCCTTCGTCAAATCCCAGTGGTGCAGAGTTTGATCCAGAAGAAGATGAGCCAACATTAGAAGCCTCATGGCCACATTTACAATTGGTGTACGAATTTTTTCTCCGGTTTTTAGAGTCTCCAGATTTTCAGCCAAATACAGGAAAAAAATATATTGATCAAAGATTTGTACTACAACTTTTAGAATTATTCGATTTTGAAGACCCTAGGGAAAGAGATTTTTTAAAGACACTCCTGCATAGAATATATGGGAAATTTTTAGGTTTAAGAGCATATATTCGAAAACACATCAACAATATATTTTACAGCTTTATATATGAAACAGAACACCATAATGGTATAGCTGAATTGTTAGAAATTTTAGGAAGTATTATAAATGGTTTTGCCCTGCCATTAAAAGAAGAGCACAAAGTTTTTTTGTTAAAAGTTTTATTACCTTTACATAAAGTGAAGTCGTTAAGTGTTTACCATCCTCAGCTGGCTTACTGTGTTGTACAGTTCCTAGAGAAGGATCCAAGTCTTACAGAACCTGTAATAATGGGCCTTCTAAAGTTCTGGCCAAAAGTACATAGTCCAAAAGAAGTAATGTTTTTAAATGAATTAGAAGAAATTTTAGATGTGATAGAGCCTGCTGAGTTCACCAAAGTAATGACGCCACTGTTCAAACAACTTTCCAAATGTGTCTCTAGTCCACACTTTCAGGTGGCAGAAAGAGCATTATACTTTTGGAATAACGAGTACATCTTGAGTTTGATCAGTGACAATGCATCAACAATACTACCCATTGTGTTCCCAGCTTTATATAAGAGCAAGGAACACTGGAACAAGACAATCCATGGCTTAATATACAATGCACTGAAACTGTTTATGGAGATGAATCAGAAGTTGTTTGATGATTGTACACAACAGTACAAGGCTGAAAGGCAGAAAGAAAAAGAAAGGATGAAGGGCAGAGAAGATGCTTGGACAAAGGTTAACAATTTGGCAATTGGAAATCCGCAATATAAAGAATATGCAAACAAGGTGAATGAAAACAGTGAGAAAATGGGAAATCCAGGAACACCAAACAGTGTAGGGACGGACGACGACCCAGATTTTAACATGGAAAAATTAGAAAAAGAAGCCAATGAGATATCTTCAAAAAATGCAGAACTACGACAGTTATCGAAGAAAAAAGGCAAGGGAGAAAAGCCATTGTTGCGGCGAAAATCCGAACTACCACATGACATAACTATGATTAAAGCTCTTGAGAGTCATAAAAGGACTGATGATTTTCTATCAACTTCGTCAGAGAGCAGTTCTACATGAGACCAAATCTGTTTAGTTTATATTGTGGACCATTTCTGTCGTAATGATAGGACTAAAATAAATCATCCATTATCTTTATCTGGGGTCTGCAAGTTAGCTGTTTACGAGAGAGTGTACTTGATGAGAGATGGCTGTGAGAAAACTGTTAGGAATTTTTATATTGTACATAATGAAAGATTGCTTGTTGAAAGAATTTTATGGTAAAAACTTAATTTTGACCTATGTGAAGAATGGAAGTCATATTATTATTGACATGTATGTATGGGTCAAGATTTTGTATAATTGCAATTCTGTGATAATAATAAAAAAAAAAAGTCCATTTAATTTGACTTGCAGCACCCTGTGATACTCCGCCCACTTTGCCTTAAAAGGAAGGAATGGGGAGGAGTCACCATTGTAAGGACTAACAGATGTGTACATTGACTTATCTCATAAATGTACCTCAGGAAAATATCATGCAAATGAAATTGATGGGGGATGATATATGCTTAAATATTGTATAGTTCCATATCAAGCTCTTTGTTGGCAAGTTGAAAACATAAAAGTCTTTGTTCATCAGAAAAAAAGTGAGTTGAATGTATTCACTTAGATTTTTGCTAACTTCATCATGTCATACCGGTGTTGTTTATGATCAATTTGTCAGTACAAAAAAAAATTTATCAGTCACCATTTTGAAAATTTACTCTCATTTTATTTCCTGCCAATAAAAAATAATACAATAATTTTTTTTAAACTGTTAAAGCTTTCGTGGATGCTGTAGAAACAAGAAACTGCTGTTTATCTTTTGTAGCCGTAAGCTATTAAATCTGATGTAAAATATAGTCAATACTGAGTATGTTAGCAGTCTGTGCCAAAAACCACTAGCCCTAACACCCAGTCAAGCAAAACTTGGTTCAGGCTAGTAAAAATTGGTTCAGGCTAGTAAAAATTGGTTCGGGCTAGTAAAAATTGGTTCGAGCTAGAAAAAATTGCATAACATTTCCTTAATCAAATAAAAAAAATTCTTCTTAAAATGCTGTTCGGGCTAGTTTGTCCAAATGTTTTTGGCACAAACTGTTTTAGCTATCACAGAAAATGACTTCAAAAAATATTTTATGATTGTTAATTCACATTTTATAAATGAAATATTTTCGTTTTTGAGATATTGTCTAAAAGCAAATAATCAGTATTTTGTTTTCTTGTACAATATGCTTCTGAGAGGAATAAATACAAATAATTTTAAATATGTGTAGTTAATGATAAAATAACATTAAAAAAAATGTTTAAATATTTTTAAAATGTTGTGCAAAAAGTAAAATGTCCCCAAAAAGTGCTATATATGTAATGCCATTTGCTGTTGTGTACTAATATTGTGACAAAATATGTGAAAATTTGAAAACAGCATCTATGAATTTAAGTCTTTAATTATATATATTTATATAAAATTTTACAGTTTACGTACAAAATTAACTAAAACATTTGAACAGACACAAAGATTTTGTAAGTAAGTAGCCAGTCCTCGTGATGAGCATCAGTTCCTAGAGCCAAGACCAGTAAAAGTTTGTTCGGACCAGTAAATTTTTCAGTTTTTATTTAGAAATATATAAAAAATAAATTCTAGAATTTTATTTGGACCAGTATATCTAAATGTTCATTTCAAATACTGAGTAGGGATCA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01603	B56	Protein phosphatase 2A regulatory B subunit (B56 family)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002554	Family	Protein phosphatase 2A, regulatory B subunit, B56	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10257	SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000159	Cellular Component	protein phosphatase type 2A complex	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0019888	Molecular Function	protein phosphatase regulator activity	Interproscan
GO:0072542	Molecular Function	protein phosphatase activator activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11584	PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'	-	mRNA surveillance pathway	ko03015	PMID: 28812709
			Sphingolipid signaling pathway	ko04071	PMID: 28812709
			PI3K-Akt signaling pathway	ko04151	PMID: 28812709
			AMPK signaling pathway	ko04152	PMID: 28812709
			Meiosis - yeast	ko04113	PMID: 28812709
			Oocyte meiosis	ko04114	PMID: 28812709
			Adrenergic signaling in cardiomyocytes	ko04261	PMID: 28812709
			Dopaminergic synapse	ko04728	PMID: 28812709
			Human papillomavirus infection	ko05165	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_60785-3.15 global RNA-seq network