Gene detail

Detailed information of Bpl_scaf_60324-4.7 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_60324-4.7	NF-E2 INDUCIBLE PROTEIN	Bpl_scaf_60324	470579	485700	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_60324-4.7

GAAAAATTGTAGAAGTAGCAGCGAGTAGAAATAGAAGCGAGCAAAATGGCGATAGTTGTTTACAGTTGAGAGGCGGATCAAGAAAAATCTAAACATTTTGTCGATTGTGAGCTTGCATTGCAAAATTTCAATATGTCTGCAGACAAAAAAGTGAACGATGTTTCAAATTTAAGGATAAACAACTCCAGCCAAAATGAGAATACCCCAGTTGGTGATGTGATTGATCAGACCGATCTCAATGATGACGCATCACCAAACCTTGATGTAGATGGCATTGAAGAAATCAAGTATTCTGGTGATGATGCTTCAGATCTGGATCAACATGATGTTTATATACCTAATACAGGGAAATCAAACATAGAAATGGATCCAGAAATGTCAAATGATGATAAAATTGACACTGATAAATGGGCTATGCCTTCTCCACAGAAACACCAAAAGTCAAGTTGTGCTATTGAATCAAAACTAGATCAGAATAATGGGGAGGAGTGTAATAATTCTACAAATGAAGAACTAATGGTGAAGTTACCTCCCTTGAAAAATAAAGATTCTCTAACAGAGGATACCAATAAAGACAGTGAACAATCAAATTCACCAAAACCAGATGTAAATTCAGAAAATTCAACTACAAACAATTCTTCAATATCCGAAACAGTAGATGAAGAATTGACAGTTAAATTACCACCTGTTAGCCAAGAAGCTACCAATGAGGTGAAATGTGATGGTGCTGTATCAAGTGATTCTTTAAAACAAGATAAAACTGATAATGTAAATGACCGATTTCAGTCACCCATGGACGATAGCTCAGATTCTCTAGAGGGAGTATATCAAATCAAGTGGGTAAAGTTCAAAGGAAAAGACGTACCTATAATTACACAGAATGAAAATGGACCTTGCCCTCTGTTGGCAATTATGAACGTGCTTCTGTTAAAAGGGAAAATGAAATTTACATCTGATACAGAAATCATATCATCAGAACAAATGATGGCCCATCTAGGAGAATGTATATTAGCTGATAAACCACAGAATGTTACAGAGATTGTGCAATTAAATTATGAACAAAACATGCATGATGCCATGGCTGTGATACATAAACTACAAACAGGACTGGACGTCAATGTCAAATTTAATGGTGTAAGTGAATTTGAATACACACCTGAATGTATAATATTTGATTTACTTGGAATATCACTGTACCATGGTTGGTTGATAGACCCACAGAACCATGGAGAGGTGTCGGCCATTGGCAACTGTAGCTATAACCAGCTGGTGGAGAAAATTATCTCGCAGAGGAGTTCTGAAAACAATGATCTGATTACTGAGGCACTTGTAGCCGAAGGTTTCTTAGACAGAACGGCATCACAACTTACATACCATGGTCTATGTGAACTGTCGTCCACTGTAAAACCTGACCAACTTTGTGTTTTCTTTAGAAATAACCATTTCTGTACCTTATTTAGACAAAAGGATGAGTTATTTTTACTGGTGACAGATCAGGGATTTCTACACGAGAGAAATGTTGTATGGGAAACATTAAACAATGTAGAAGGAGATCATTATTTCGTAGATTCTGAATTCCACACGTATACAAAACCAGCGCCTGCCGAGCCAGTTCTTCCTCCTGATGTGTCAGTAAACAGTGACGAACAAGTTAATCACGATTATTTATTAGCGATGTCACTACAACAAGAACTACAGTATGTGGAACAGATTGATAGACCTGATGCTAATCAACTACAGCGTCAACAAAGACCTCAATTATCAGATGCTGAACTGGCTGCCAGACTTCAAGCAGAAGAAGATGCACAAGCTGCTCATCATGCTGTCCAACAACCAGCACAGCACCATGGCAATGCAAGACCAATACCTAGTGGTAGTCATGGGCAACAGAGATCTAGAGAAAGAGAGAACACCAGGGATAGAGAACGACCAAGAGATAGATCTAAAGATAAGGAGAGCAGTTGTTCTATTTTATGATGTGAGTTGGCAACAATAAATACATTTTTCATCCTTCCTAAAATTGGCGAACTACAGACAGTCTCCTAGTCCTTGTTTTCATGGGATACAAAACAGGAAGTAGTTGAAGGGGAGGTAACCTAGTCATCAGTAATGACAGACCAGTGTGAGATGAATGGGCATAAAACTTTTTTTG

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	DUB\|MINDY\|MINDY

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04424	MINDY_DUB	MINDY deubiquitinase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007518	Family	MINDY deubiquitinase	Interproscan
IPR033979	Domain	MINDY deubiquitinase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18063	NF-E2 INDUCIBLE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0016807	Molecular Function	cysteine-type carboxypeptidase activity	Interproscan
GO:0071108	Biological Process	protein K48-linked deubiquitination	Interproscan
GO:0071944	Cellular Component	cell periphery	Interproscan
GO:1990380	Molecular Function	K48-linked deubiquitinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_60324-4.7 global RNA-seq network