Gene detail

Detailed information of Bpl_scaf_60289-3.32 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_60289-3.32	UROCANATE HYDRATASE	Bpl_scaf_60289	450782	472362	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_60289-3.32

ATGTCTTCTCTGAAAGAAATTTGTGACGGAATTCCCGACCCCCTTCCACAACGCAGACAGAGAGACGAAACTATATCACATGCTCCGGTACGAACACCTGATCTATCACCGGCTGAACAAAGGCTAGCACTACAGAATGCACTAAGGTATTTCCCGCCCCATCAACACAGCACATTGGCATCAGAATTCGCAGAAGAATTAAGGAGTTATGGCCATATCTACATGTATAGACTTTTACCAAGGTTTGAAATCAGGGCATACCCTATAGATGAAATTCCTGGTAGAAATCGACAGGCAGCAGCCATTATTCATATGATCTTGAATAATCTTGATTCTCGTGTTGCTCAATTTCCTCAGGAATTAGTAACATACGGAGGAAATGGACAGGTTTTCTCCAACTGGGCCCAGTTTTGGATTACCCTCACATATTTATCTGAAATGACAGAAGAACAAACGTTAGTGATGTATTCTGGTCATCCTATGGGATTGTTTCCCAGTTCTCCATCATCACCAAGACTTGTTATAACCAATGGAATGGTCATACCCAATTACTCCTCACGGGAGATGTATGAGAAAATGTTTGCGACTGGAAATTCCATGTATGGACAAATGACGGCGGGGAGTTATTGTTATATTGGACCACAGGGAATCGTACATGGCACAACGTTGACGGTGCTGAATGCTGCCAGACGCCATTTGCATTCGACTGATATGAGAGGAAAGGTATTTGTGACTTCAGGGCTAGGTGGAATGAGTGGTGCACAACCAAAAGCAGCGACCATTTGTGGATGCATCAGTGTAACGGCTGAGGTTAGCAGAGAGGCTTTGGAGAAACGTTATAATCAAGGCTGGGTTAAGACAGTTGCTTATGATCTAGACGAATGCATAAGACAAATCCGTAATGCCAGGCGACAAAGGGAAGCAAACAGTATTGGCTACCATGGAAACGTTGTAGATGTATGGGAGAGACTAGTGGTGGAATATCAGAATACTGGAGACTTGTTAGTAGAGTTAGGTTCAGATCAAACATCTTGTCACAACCCATACCTAGGAGGGTACTATCCTGTACAGTTGACTTATGAAGAGTCTAGAATTATGATGCACGAAGATCCAGTCCGCTTCAAGAACCTCGTACAAGAAAGTTTAAGAAGACAGATAGTAGCTATCAATACATTGTCAGACGCTGGCATGTATTTCTGGGACTATGGAAACGCTTTCCTGTTAGAGGCTGCACGAGCAGGAGCTGACGTAGGAAAAGATGAAAGCGCTGCTGGAACTAAATTTCGATATCCTTCATATGTGCAAGATATAATGGGAGACATCTTTTCTCTCGGATTTGGGCCGTTCAGGTGGGTATGTACATCAGGAAGTCCAAATGACTTAGATATCACTGATGAAATTTCAGCCAATGTCTTGGAAGATATCATAAATGAAGGAGTTCCAGAGACAATAAAACAGCAATACAGTGATAACATAAGATGGATCCGAGAGGCTAAACATAACAAATTAGTAGTTGGATCTCAAGCAAGAATATTGTATTCAGATCAAATTGGCAGAATGAAAATAGCTTCAGCATTCAATGAGGCTGTAAAAGACGGTAAGCTTAAGGGACCAGTAGTTATTAGTAGAGACCACCATGATGTCAGTGGTACAGACAGTCCATTTAGAGAAACTTCAAACATATATGATGGTTCAGCATTCTGTGCAGATATGGCAGTTCAAAATGTGATTGGAGATGCCTGTCGTGGTGCAACATGGGTAGCAATACATAATGGTGGTGGTGTTGGCTGGGGAGAAGTTATGAATGGAGGATTTGGATTGGTCCTTGATGGATCACAGGATGCTGGAGATAAGGCAAGGAAGATGTTAGCTTGGGATGTATCAAATGGGGTGGCTAGAAGATGTTGGTCAGGCAATAACAAGGCAGAGGAAACAATTTGTAGAACTATGGATCATAATAAAACACTCAAAGTAACAATTCCTCATCATGTGGAAGATTTAGATCTATTGGACAGAGCTCTACAGGAGTAA

Transcript

Bpl_scaf_60289-3.32

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01175	Urocanase	Urocanase Rossmann-like domain	Domain	Interproscan
PF17391	Urocanase_N	Urocanase N-terminal domain	Domain	Interproscan
PF17392	Urocanase_C	Urocanase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023636	Conserved_site	Urocanase conserved site	Interproscan
IPR023637	Family	Urocanase	Interproscan
IPR035085	Domain	Urocanase, Rossmann-like domain	Interproscan
IPR035400	Domain	Urocanase, N-terminal domain	Interproscan
IPR035401	Domain	Urocanase, C-terminal domain	Interproscan
IPR036190	Homologous_superfamily	Urocanase superfamily	Interproscan
IPR038364	Homologous_superfamily	Urocanase, central domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12216	UROCANATE HYDRATASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006548	Biological Process	L-histidine catabolic process	Interproscan
GO:0016153	Molecular Function	urocanate hydratase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01712	hutU, UROC1; urocanate hydratase	EC:4.2.1.49	Histidine metabolism	ko00340	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_60289-3.32 global RNA-seq network