Gene detail

Detailed information of Bpl_scaf_60067-7.13 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_60067-7.13	CELL DIVISION CONTROL PROTEIN 6-RELATED	Bpl_scaf_60067	714076	739953	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_60067-7.13

ATGTTTGACAATCAGGATTTAAAAATGTCGACAGATGTTCAAAGAAAATTGGAATTCCCTGTCAAGAAGTCCACACGTCTGAGGTCAAAAGAGGATGGAAGTAAACAAAGTCGTGATAATGTAGCAGACCCAACACCACCAAGAAAAAGAACTAAAGATCACGATGTCCAAAATAAGAATCTACAGTGTTCACCAACAAAGCAAAAAAAGGGGCAAACAAAAGTTGAAAAAGAACCTAATACAAGACAAAATGACATAGATACACCTAAATCAGAAAGATCTAGTCAACAGTTGAGATCAGAAACCCCTACATCCAGTAGGAGCGGGAAAATAGGAACACCGAGCACACGACAAACTGCTAGATCACCAAGCTCGCCATATTCTAGAACACCAAGCAGGAAAAATGGAGATACAAGAAGAAAAAATGCCGAAACTCCAATCAGAGGAAAGGCGAAGTCATTGGATATGGCGGCAGCATCAGACAAGAAGACGCAACTAAAAGAAAAAAAGAATGAAGCTGAAAACAATGAATTGTGGGAGTTGATTTCTATTACATCCAGCGATGATGAAAATTCTACACCGAAACCTACTGCAAAATTAAAGAGTTCCAGAAAAGTAATAAGTGAAAATAAAATCTCAAAGAATTTTCCATTTTCGCCTAAGAAGCAATCAGAGCCATTCAGATCTCCAGAAGGGAAAGTATTACCATCACCGTTTTTAGTTTCACAAAATGTTATTATTTCACCAGAATATCCACCATCTCCAAAAAAGCATCTGCTATCTCCGCGAGGATCTGATCACCCATTATCGCCACGGAAACATCTTCCACCTGATCACTTCCTCTCGGCTAGTAGAAATATTTTCTCGCCTACAAAGTCAGATTTTGCTCTGTCTCCACGGAAAGTTATGTCGCCATCATCTAGAAACGAAAATCAAATACCATCAAGGAACCTTTTGTTATCTCCTGGTACAATGATGAGCAAGCTGCAACTTTCGTCTCCAGGACGGATACCGTTGTCACCCAGAAAAATGAATGACAACATTATGTCATCGCCAGGGAAAGGCACGTTAAATTTATCTTCACCGGTGAAATCCATGGACACATTACCAGTCAAGTCGCTATTCTCATCGCCTTATTCACAGAAAAAGAATACACCATCATTAAAGTTGGAGAAACAAAAAGCTCAAGTCTATCACATGGCCAAACAATCTTTCCATACAGCTAAACCAGACCGGCTTGTAGGACGAGAACGGGAGATGGAGACTGTTAATCAGTTTGTAAGAGGTCACATGACCAAGAAAACTGCCGGCAGTTTATATATATCTGGGGCTCCAGGTACAGGAAAAACTGCTGTGCTGACCCATATACTGGACAATGTCAAGGCTGCTCACTGTTGTAAATCTGTATATTTGAACTGTATGACTTTAAAAGATTCTGCTACAGTCTATGGCAAACTGTACACAGATTTGACTGGGAAATCGCCACCATCAGCAAAGGACAGATTACGTGCCATTGAAAAATACCTTTCTACTTCTGGATCAAGAATAATCATGGTACTAGATGAAATAGACCAGTTAGACAGTAAAAAACAAGAGATACTGTACACCATCTTTGAGTGGCCATCTTTATTGAATTCTAGACTAATACTCATTGGTATTGCCAATGCCTTAGATTTAACAGATAGAATTCTGCCACGACTACAAGCCAGACCCAAGTGTAAACCTCAACTATTGAACTTTGCCCCTTATAGTAAAGATCAGATAGCCAATATCATAAAGGATAGACTTAAAAAGATAGAAGAGAAAGGGTATGCCGTCATGGAGCCAAGTGCTGTTCAATTCTGTGCACGAAAGATCTCTGCCATAGCAGGTGACATGAGGAAAGCTCTAGATGTGTGCCACAGAGCCGTAGAACTCGTAGAACGCGAAGTAAAGGCACAACAAGTCATATCTAGTCCTACCAAGCGACCACCAGCAGTGCCAAAAAAGATTGGCGTAGTCCAGATAAATAAAGTCCTGTCGGAAGTGTATGGTTCCAGTTCTACATCCAATAGTCAAGAAAGTATACCACTGCAACAGAAACTGATAATGTGTACCTTGTTATTAATGGTGAAACAAGGCAAATTTAAAGAAGTTACGATGGGAAAGCTCCACGACACTTATAACAAGATTTGTAAGAAAAGACAAATGGCTGCTGTTGATTATACAGAATATCAAGGGATCTGTAGTCTGCTGGAAACAAGAGGCATTATGGGAATTAAAAAGGCAAAAGATGGACGCCTTGCTAAGATCGTGTTGAAACTTGACGAGAGAGAATTAGAACACGCATTACAAGATAAAATACTTGTGTCATCATTGATGCAAGATGGCCTCCCTTCTTGA

Transcript

Bpl_scaf_60067-7.13

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09079	Cdc6_C	CDC6, C terminal winged helix domain	Domain	Interproscan
PF13191	AAA_16	AAA ATPase domain	Domain	Interproscan
PF17872	AAA_lid_10	AAA lid domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR015163	Domain	Cdc6, C-terminal	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR041083	Domain	AAA lid domain	Interproscan
IPR041664	Domain	Orc1-like, AAA ATPase domain	Interproscan
IPR050311	Family	Origin Recognition Complex 1/Cell Division Control Protein 6	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10763	CELL DIVISION CONTROL PROTEIN 6-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003688	Molecular Function	DNA replication origin binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0033314	Biological Process	mitotic DNA replication checkpoint signaling	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02213	CDC6; cell division control protein 6	-	Cell cycle	ko04110	PMID: 28812709
			Cell cycle - yeast	ko04111	PMID: 28812709
			Meiosis - yeast	ko04113	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_60067-7.13 global RNA-seq network