Detailed information of Bpl_scaf_59830-6.8 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_59830-6.8WD40 REPEAT PROTEINBpl_scaf_59830582484607668-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR045184FamilyWD40 repeat-containing protein SMU1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR22848WD40 REPEAT PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008380Biological ProcessRNA splicingInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13111SMU1; WD40 repeat-containing protein SMU1-Spliceosomeko03041PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_59830-6.8 global RNA-seq network
TOP