Detailed information of Bpl_scaf_59079-5.31 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_59079-5.31CCA TRNA NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIALBpl_scaf_59079543826553065-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12627PolyA_pol_RNAbdProbable RNA and SrmB- binding site of polymerase ADomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR032828DomaintRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domainInterproscan
IPR050264FamilyBacterial CCA-adding enzyme type 3 subfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46173CCA TRNA NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIALInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0001680Biological ProcesstRNA 3'-terminal CCA additionInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:1990180Biological Processmitochondrial tRNA 3'-end processingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00974cca; tRNA nucleotidyltransferase (CCA-adding enzyme)EC:2.7.7.72
EC:3.1.3.-
EC:3.1.4.-
RNA transport ko03013PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_59079-5.31 global RNA-seq network
TOP