Detailed information of Bpl_scaf_59079-14.15 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_59079-14.15CNH DOMAIN CONTAININGBpl_scaf_5907913086061396769-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00780CNHCNH domainRepeatInterproscan
PF01457Peptidase_M8LeishmanolysinFamilyInterproscan
PF10366Vps39_1Vacuolar sorting protein 39 domain 1RepeatInterproscan
PF10367Vps39_2Vacuolar sorting protein 39 domain 2DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000547RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan
IPR001180DomainCitron homology (CNH) domainInterproscan
IPR001577FamilyPeptidase M8, leishmanolysinInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019452DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1Interproscan
IPR019453DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2Interproscan
IPR032914FamilyVam6/VPS39/TRAP1 familyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12894CNH DOMAIN CONTAININGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006914Biological ProcessautophagyInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0034058Biological Processendosomal vesicle fusionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for Bpl_scaf_59079-14.15 global RNA-seq network
TOP