Detailed information of Bpl_scaf_59079-12.14 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_59079-12.14SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINBpl_scaf_5907912212741286177-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001589Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR016343FamilySpectrin, beta subunitInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0008091Cellular ComponentspectrinInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06115SPTBN1_4_5; spectrin beta, non-erythrocytic 1/4/5-Cytoskeleton in muscle cellsko04820PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_59079-12.14 global RNA-seq network
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