| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_58975-0.1 | PIRNA BIOGENESIS PROTEIN EXD1 | Bpl_scaf_58975 | 70347 | 75218 | + |
| CDS | |||||
| Bpl_scaf_58975-0.1 | |||||
| Transcript |
| Bpl_scaf_58975-0.1 |
| Protein |
| Bpl_scaf_58975-0.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01612 | DNA_pol_A_exo1 | 3'-5' exonuclease | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002562 | Domain | 3'-5' exonuclease domain | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR052144 | Family | piRNA biogenesis EXD1-related protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46628 | PIRNA BIOGENESIS PROTEIN EXD1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0006139 | Biological Process | nucleobase-containing compound metabolic process | Interproscan |
| GO:0008408 | Molecular Function | 3'-5' exonuclease activity | Interproscan |
| GO:0034587 | Biological Process | piRNA processing | Interproscan |
| GO:1990923 | Cellular Component | PET complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12591 | RRP6, EXOSC10; exosome complex exonuclease RRP6 | EC:3.1.13.- | RNA degradation | ko03018 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_58975-0.1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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