Gene detail

Detailed information of Bpl_scaf_58355-0.1 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_58355-0.1	PROTEIN FAM45A-RELATED	Bpl_scaf_58355	20442	36404	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_58355-0.1

ATCCTGTCAAAATGTCAGCCCCCATAAATCTTATTCTTAGCAAATCAGCTGGTTTAATAGAGCGTGACATTAATGGGGATATTTTGTGGACATGGTCTTACCCAAATGTTTCAGAAGAGGAAAGAAATTTTTTCATCAAGAAGAGCCAGTTCACATTAGCAACAGATGACTTTGTTCCTTTCTGGTATAGTCAGTGGAAAAGAAGCTGGTATTATATATACACTTGTGAAACAACAAATTCTGATAACTTGCCAAAGGTTACACATTTTTCATTGGTTCTGATTACAAAGGATTTCAATCCAGAAAAATATGAAACACTATGTAAAATTTTATGTAAAAAATACAGACAGACAGGGAATCCAGCAGCAATGTTAGAATTATACTTGCATGTTATAACGAGAGGAACCTGTACAACAGATGAGAATGGCAAATTTTCTGTGAGAGATTTTGACAATAAAAGAGCTTTTGCAAACTCAAAATTAAAAGAAATAATAACAACATTTGGATTAGAGACTATACTAATTTATACAGCATTATTACTGAAGAAAAGAATTGCAGTTTATTATCCTCAAAATCAGTTAGAACAACTAATACAGTTTATAAGATCATTACCTGCGTTTGTATGGCACAGACAGAACTGGGATATAGCCTATCCTTATAAAGAATTAGATGAACTTGATGATTTGTTACAGAGAGGTAGTTATGTCGCTGGGTTTACTGATGCTTCTGTTGAAGGGAGGACAGATTTATATGATATTTTTGTAAATCCATCAACCAGTCAGATAATAACAGCTAGTCATGCCAAAGAATCATTTGCAATGGGAAAGCTACACAAAGACACAGCTATGTTCATGGTACAATGTTTAGAAACAGAAGATATTACAGATGAACAGCTAATAAAGGAAATTGCTTCCAAAACAAGAGAATTAATAAACAACTTAAAGTCTTTAACAGTAAAAGGAGAAGACGATAAACAATATATCACGATAGAAGTTTTACGTGAGAGAAAGATGACACCAGCTACAGAAAACTTTCTTTTTAATTTAGCAGCATGTGAAGGACTAGTACAAATGTGATTTCTATATACAGTTACCAGTAGTTTCATATGAAACATTACTATTTTGAAATACATGTATAAGTTATTTATAGACTATTTATGTTTCCTTTGTTATGTACTCCAACATTACACAAATATATATTGTATACAAATATTCCTATGATATACTATTGTAAATTATGAAAAGAAAGTTAAAAGTGATGATCAACAATTCCATCAATATTAACAAAACAAACCTCTCACCTTCACTCACTGAACACAAAATAAAAATAGACCACGACATATGATGTTGGATATCCAAGTCCTGGCTTGGAACAGGCACAAACATTACATATTATTACCAGTACATGAACATATAGCATTATTATGGATCATGCTAGATTGTATTTTAACATTTGTAACTTGAATGAAATAATTACACAGATACTGAGTTTTTTTAAACTGGTACCTGATGAATATAAATTGAAATTGCAAGTTTATGTACCAGTATTTATGCAATGCCTCTATGTGCATGAGATGGGAGTATGATCATTATCAAGAATTGAGAATTCACTCTATATCAGTTCAATATTTTTTAATTTACTATGATGTTACCACCAATATTCATGTTAACCTTTCAGTTAAGAATTTGACAATTCAGGAATGGCTTCCATCCAGCCCACTGATATATTAGATGTATTATTTTACATGATCAAAAAATGCCTAGGTATTATTGAATCACAATGCCAAATTAAGATGAAATAGAATGTTATAATGACATTGTATTGTCTGGGTAGTAATATATAAACAACATATATTTGAGAGGTGACGGAGTATATTGTTACGCTGAGAAATCATTGGCAATCGAGGCGAAGACAAGGTTAACAATATCTTTGTCACCTTCTAAAATAGATGTTATTTATTTGATTATATTGAATGTTGCATTCTGTAATTTTGTCTACAATTTAATCTTCTACCCTTTTGAATTTTTGTTTTATTGTATTTATTAAAATTGAATAGTAAAAATTCCCATCCGTCTGCAGCACATAGTGAAATATTCAAGAAACAACAACAAAAGCTTCCTTGTGTTTTATGTGATTATCTCTCATGTTTATTGAGAGTATGACAAACAAACAAATTGTCACCTCCTCCGGAGGGTGACAGACTAAAATGTCACCTTCTTGTAAACCAATGAATATGCAGGATTTTCAGAAAATTTACATCAAATATAACAATACATTCTGAAGCAGCAGTACAAAATATAAATCAAAATTTTAATTTTATCTTATGAGTTAAATAATTTTAAAAAGAAATATTTTGAAAAAAGTCTTTTACCATATTTATGGTGAAATTCATACTTTCCCTAGTGTCAAGATGAATATATACAAGTAATGTTTTCCATTACTCATTTTGTTTATTAATTAACAAGCATGTAATTACAGTCAAACCTGTATTAAGAGGTCACCTTTGGGACAAGGTAAAAGTGGCCTTATAAGACAGGTGACCTCTCAACATAGGTTCAATTTATATGAAATTTTCTATAACATGACAAGAAAAATGTTACCTTTAAATACAGGTGGCTGCTTAATAGAGGTGACCACATGGGCAGGTTTGACTGTAATTTTTAAAACAACATTTAGTCAACTAATGTGAGCTAAGGACAACTAACACAATGTACCATTAAACTAACTGATTTATATGTACTATTTCATGTTGCCAGTCAAGAAATATATTGTGAAGTGTCTACCATTTATGATAAAGGACAGTTCTAGATTCATAGCAATATATTATTGTTATTTATTACTGTATATGTTGTAAATATTAATAACACACAATAAATTGTTATACATTTATGTATTATAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08616	SPA	Stabilization of polarity axis	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037516	Domain	Tripartite DENN domain	Interproscan
IPR042431	Family	DENN domain-containing protein 10	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28544	PROTEIN FAM45A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005770	Cellular Component	late endosome	Interproscan
GO:0015031	Biological Process	protein transport	Interproscan
GO:0031267	Molecular Function	small GTPase binding	Interproscan
GO:2000641	Biological Process	regulation of early endosome to late endosome transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_58355-0.1 global RNA-seq network