Gene detail

Detailed information of Bpl_scaf_58266-3.11 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_58266-3.11	PROTEIN PHOSPHATASE 4 REGULATORY SUBUNIT 4 PPP4R4	Bpl_scaf_58266	327129	368518	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_58266-3.11

AGTCACAAGTGTATAGTTGTTGTATACATACATATTATTAAGGAACATCATGTCAATCATTCATGGCTGACATTTTTCTTTTTATTATTTTTTCAGGAAGTTCTTCATGTTGCACAATGTGAAATGCAGTATGCAGCATCAGCTGCATTTTTACAAATACTACAGAAAAATTTAGTCCCAATACAGAACTATACCCAAACATTTCTACAGACAATACTCAACAGTGTTGATGGAAAAGATCCAGATGTATCAAGTGCCTGGCTAGATACTTTACTAGATGTTATAGAATTACTACCTAAAGATGTTATAAAGAAAGAGATTTTACATGTTGCAATAGCCAAAGGTCAACTTTCTCAGTCAGTTGCAGCTCGAATGGCATGTTGTAAGATACTGGGGAAAATCTGTACTAAGTTTGAACCTTTTGTGATAAAAAAGGAAATCCTGCCAGTTGTACAGTCCCTCTGTCAAGATGTTGATTATGAGGTTCGTGGATGTATGTGTAATCAACTTGGCTCTGTAGCTAGAGGTTTAGGGCTAGAAGCTACTAAAAGTGCAATATTGCCAGAGTTAGTTGAGCTGACAAAAGATGAAGAAAGTTCTGTTAGAGTACATGGTTTAGAAACTGTTGTTAATGTTCTCTCTTTACTTGACTCAGAAACTTGTACAGCTACAATCATTCCATTAGTTTGTAAGTTTTGTCAACAAGCAATGCAATCTGAAGATTCTACACTTCCAGAAGTTGCCAAACAGATCGGTAAAGTCAGTCATGGTCTGTTAGCCTACCTAACAGATGAACAGAAACAGTGGTTTATAGATTATTTTAAGAAGTTGTGTAAAGTTGGCTTAACTGTAGAAAAAGTTAAAGGAAGTAAAGATTCAGATAAAGAAAGTCCAACTGTTATAGAAATTCCTGACTTCTCTGAAGATGACAAGTTCTTGGAGTGTAGAAAAAATTGTGCATATAACTTTCCTGCAATGGTTTTATTTATTGGTGCAAAGCATTTTAAGGCAGAGTTACTGGGGTCTTTCTCTAGTCTCTGTAAGGATCCTAATCCCCATGTTAGGAAAATAGTATCGGGTGGCTTTCATGAGGTAGCCAAAGTACTGGGTCAACATGTCTGTGTAACACAGTCTGATCTTATACTACTATTGAAGGATGAATCTACTGATGTGCTGAAAGGTGTGATAGCAAATATTCCATGTATATTAGACTGTTTATCAGGGACTGGTACTAACCACTCATTATCTGAATCAAAGCTAAATGTATTAAATGATGTGATAGCTGCTGTAATAAACTCAGAACCTGTCATATTTAGTTCTAATAATTGGAGATTACAAGAGCATTTAATGGACAATATATCTTGTCTAATAAAGTGTTGTTCTAGTGATGTATTATATCATAAAGTCATTCCTGTTGTGTATCCCAGAATTAAAACTGCTAGGGCATTGCCTGTTAAGCATGCAGCCTGCAGATCTAGTTTAAAAATTATTAGAAAACTTAAAAAATTAACCCAAAGAGAAGAGCTCATCCATGGATTTGTACAAGATTTCTGCCATGGAAGAAGCTGTCATCATCGTAGCTTATTTGTTGACATTTGTAAAAATGTGATAGAACTTTATTCAAAAAACTTTTTTAAGGAATATTTTTATGAATTTGTGTTAGAACTACAAACAGATTCCGTGCCAAACGTTAGGTTACGGTTGTGTTCAATACTTCCTCAGTTAAAAAAAATTATCAAATTACCAACGGACAGGAACTTACTACAGCAGCTAGAGTCTTGTGTTAGGAAAATATTATTAAGTGAGAAAGATAGAGATGTATTAGTAGCCATCAAGCAGGCTGTAGATGAACTAGATAAGATACATGTTCAGATGGAACCATTAACAAAAAGATCCTTTTTTGAACATGATCTCGTGGATCAAGAGAAAGAAGAAGAAGAAAAATTATTAATAACAAATGAGGAAAAAGAAATAAAGAAAGAAGAAGAAGCTGCAGAGAAACAAAAAGCCAAGGGAGATAAAAAGGGGAGCTCATCTGCAAAAAAATCAGAGAATGGAGGGAGTAAAATACCAGGTCCAAAAAAGGGAATAAAAAGCAGTACAGTATCCGGTTCAAGTGGATCATCAACTCAAGTTTCTCCTACCAAAGGAGGGAAATTGTCACAGGACATCATAACTAAAGATACCACAATGTCCACCGCAAGAAAAGCAGCTACTAGTTCACCAAAACTGTCCAGGTTACCAAGATATAGTTCTAGTCCAGACCTTAATAATGGTGATATCAATGGAAGGACGTCTCCTCTAATAGCCAAGAAGAATTACAATAATAAAATCCTGAACAAGTGTAAAGAAGAAAATAATGGTTTGAAGAAAATGAGGAGATACTCAAATATAGAAATAGACAATAAGAAAATAGAAACGTGTAAATCTTCAAACCAATCCAAGCTACCTCATTTCTCATGGAATAAATATGCCAGTGATGGGAGACAGTCGCCACATCCTCAAAGGGCATTTCTAGCCAGCGATGGACGATCTTCTCCCCACCCTGGAATGAGAAATATGATAGAAAATCCTTGTGCCTCAGGAAGTAAATCTACAGGTCATACAAAAACAAAACCTCCCAGTAGTGCTGGAACCTCTAGAAGAGGTTCTGAAGGTGCCACTTCAATAGCTCAGAGAAGAGGCTCTATGAGTAGTGTTAGTAGTACTAGCAGTACTGACTCGTCAATCAGAGCGTCACCAAAAGGAAGTAATGGTTTACTCTCTGTTCCTTCTACAAAAATAACTAGGAAGAAATCCAAGTGA

Transcript

Bpl_scaf_58266-3.11

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR021133	Repeat	HEAT, type 2	Interproscan
IPR039918	Family	Serine/threonine-protein phosphatase 4 regulatory subunit 4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21467	PROTEIN PHOSPHATASE 4 REGULATORY SUBUNIT 4 PPP4R4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0008287	Cellular Component	protein serine/threonine phosphatase complex	Interproscan
GO:0019888	Molecular Function	protein phosphatase regulator activity	Interproscan
GO:0032515	Biological Process	obsolete negative regulation of phosphoprotein phosphatase activity	Interproscan
GO:0080163	Biological Process	obsolete regulation of protein serine/threonine phosphatase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15426	PPP4R4; serine/threonine-protein phosphatase 4 regulatory subunit 4	-	Protein phosphatases and associated proteins	ko01009	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_58266-3.11 global RNA-seq network