Gene detail

Detailed information of Bpl_scaf_58176-2.7 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_58176-2.7	RBP-RELATED	Bpl_scaf_58176	244432	287121	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_58176-2.7

ATGGCAGAGAAAGAGGATTTTACTGTAGAGCAAAGGGCATATACTAAAATACTGGCATTGTTAGGATATTCTGCAACTGACATTAAATATGATTTGGATAAAGTGTATGGTACATCTGCCCTATCAAATCCAATGTTTGTAGGCGCACCTTGTGGAAGACATGCACAAAACACATTTTACAAAGCATTCAAATATTTTGAAGATGGAAAATATAAAATTTTGACACTTGGAGAATTTTTTTATATGAAGATAACAAGATTGAGTCCAGTATGTGTTGGAGAAATTCAAATGATATATTCAAATAAACAACTAGAAGATGATCAAGTAATGACCAGTGTCAGAGCTTATTTTCTACCAGAGCATACACCAGATGGAAGAAAAGAATGTCATGGAGAGGATGAGTTATTTGCCTTTTCTGAAAAGTTCATACTTAAGGCAGAAGATTTGGTTTGTTTGTTGGAGGATGAAGTTCGATGGATGTGGGGACAGCGGTTGTACCATGAGGATGAACTGGAAGGGGAGGTCACAAATAGTTACAAGAGGAGTGAATCTTCAACTCATTTGACAATTCTAAGTTACCCCCAATACTGCCGATACAGAGCTGTGATGAGACGACTAGAGAATGTCACAGATAAATGGTTGAAGAATGCAGTCATCTGTGCCATCGGTGGGATCATCTCCAAATCTAAAGATAACAGAATCATGTTTTGTAGAGATACATTTTATGATGCCGATTTAGAAGATTTAGATATTAACTGTGAACACTTAGCTCCAAATCTGAAAGGGAGAAAGAGAAAGAAAAGATCCTCCATGACAGGTGAAAATGGAGAATCTGATAGCAATGAAGTTTCTTCAGAATATTCTATCCCAACGTGTCCTAAAGAAAAGACTGGTAAAAGAGAATCAGCCTTACGGAATGGTTTTAGAATTGAGAAGATGCGTGTTAGTAAAGATGAGCAAGAATTCCTATTCAGTCTTCACAAGTTCATGAAGAAGAGAAATACTCCTATTGGCCGAATCCCATCTCTTGGATTTAAACAAATTGATCTCTACATGTTTTATTCTCATGGTATGAAGATTGGAGGATATGAACAGATTACACAGAAGAGAATGTGGAAACATTTATATGATATACTCGGAGGAAATCCAGGAAGTACTAGTGCTGCCACCTGTACCCGGAGACATTATGAAAAACTTCTGCTACCTTATGAAAGGCACATAAAGGGTGAAAATGCCAACAAGCCTATTCCTTTAAAATCCAAAAAGTCAAAGATTATGGGCAGACCACTTGGAAGACCCCTTGGACGGCCTCCAAAAGATAAATATAAAAATCTTATGCCAGAAAAGATCGATTCAAATGAAGTCACAAAGGTTGTCACTGAAGATAAATTCTTGAAACGCATCAAACGGAGAGAAAGATTTAAGTTAAAATTACAAGAAAAAGCTTTAAAATGGGAAGAAATAAGAATACAGAAAGCCAAAGACAGAGACAAGATAAAGAAAGTTGGGTCAAACCCAAGAACAGTGAAAAATATCCTTAACAATGCAATGGCTAACAAGTCTAAATCTGACGTGGAGGCTCCGGAAGATTTGAAAACTGAAAAGAAGGAGAAAACAGAAGAAGAAATTGAGAAGATCTCTGAAAATGAAACAGAACTAAATTGTGTCAAATCAGAACCATCTGATATATTAACCTCACCAACGAAACATGTGGCTAACCAATCAAAACTATTCAAACCTCCTAATGATGTGCAATTATCATCTAGTGCTAAACTTGAGGACATGATATTATCACAGCCAAACCCAGCAATATCTCCTAGAGGACCTCCACATCCTTCTCAACCTATGTTTTATCATAATCCATTTGTGCAATTAGGATCTATGCATCCTCTTGGATTACCCATAATTCATCAAATACCAATGGCAATGCAGCAATATCTTCAACCCACATTGCCACCAGTGAAACCAGTTCATCGACCAAACATTTTGAGAAATTCTCCGGCGAGTTCATCTTCTGGAATTAGTGAGCAAGAAAAATTGACAGCTCACACATTATTTCAACAACCAGCTCATTCTAACAGTCATCGATCCAATGTACCATCACAAATATCTGGAAAATCACCGGTAACACAGCCAGCTCATTCACATCACAAGAGGTCACATGACTCTTTGTATTCACCCAACTATAGCATTCCAAGTCAGTCTAAATCTTTATCTAATAGATCATTGCTATTTGACTTTGAAACTCCAAAGAGAGTCAAAAAGGAAAGTGTATCATCTATTAACCAGAGTGCAAAGCAAAAAAGTGCAACAGAAGATGAACAACCTCAAGATTTCAGCATGAAAACTTTATGCAAAAAAAATGAAAGCCAGTCAGACAATAGTGTTCTAGATTTAAGACAGCAGACGACTAATTCTAAAGACAATTGTATGAAATCCCAAAAGACACAAATGACATTAAACTTGCCAAAACATTCAATGGTGAATATATTAAAGACTCCAAACTTCTCCAAAAGAGGTTCTTCTCCTGATAATGTGTTCAATAAATCACATGTGTTCAATTCACCAAACAACACATCCAGTCATTCTTCTTCAAAGGGAGATTTGCAACAGGCCACACCTCCCAGCACTCAATCATCTGTGATATCACCAGTGCATCCAGCATTCCCGCAGCAGCATTTTATACGATCACCGATCCCCCAGCCTGGCATGTTCCCGTCACCCTCACAGCTACAACAATTATACGAAGCACAAATCCGAGCCACACAAGTAGCAGCCTTTGAGGAAATGATGCAAAGAGATCATAATATGTATCCCAGAATGCCATTCCCTATGTTTATGCACCTTCATATGAACAGTTCAAAGGACAAAAATAGCTATGCACATGCAAAATAA

Transcript

Bpl_scaf_58176-2.7

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	ARID

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01388	ARID	ARID/BRIGHT DNA binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001606	Domain	ARID DNA-binding domain	Interproscan
IPR036431	Homologous_superfamily	ARID DNA-binding domain superfamily	Interproscan
IPR043151	Homologous_superfamily	Bromo adjacent homology (BAH) domain superfamily	Interproscan
IPR051232	Family	AT-rich Interactive Domain/SWI1 Chromatin Remodeling	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13964	RBP-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_58176-2.7 global RNA-seq network